Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P11120_001 | Banana | cytosol | 82.93 | 83.14 |
| EER93269 | Sorghum | cytosol | 82.17 | 80.95 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 71.68 | 80.77 |
| HORVU5Hr1G107250.1 | Barley | cytosol | 80.4 | 80.2 |
| TraesCS5A01G448400.1 | Wheat | golgi | 80.4 | 80.2 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 80.28 | 80.08 |
| Zm00001d013059_P003 | Maize | cytosol | 81.16 | 77.91 |
| Os03t0801600-01 | Rice | cytosol | 80.78 | 74.22 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 80.4 | 72.03 |
| GSMUA_Achr3P01920_001 | Banana | cytosol | 5.31 | 50.6 |
| GSMUA_Achr5P27230_001 | Banana | cytosol | 4.8 | 30.4 |
Protein Annotations
| Gene3D:1.25.40.660 | MapMan:22.5.5.3.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008565 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030904 | GO:GO:0030906 | GO:GO:0042147 | EnsemblPlantsGene:GSMUA_Achr4G17490_001 |
| EnsemblPlants:GSMUA_Achr4P17490_001 | EnsemblPlants:GSMUA_Achr4T17490_001 | UniProt:M0SPR2 | PFAM:PF03635 | PIRSF:PIRSF009375 | PANTHER:PTHR11099 |
| PANTHER:PTHR11099:SF1 | UniParc:UPI0002953473 | InterPro:Vps35 | SEG:seg | : | : |
Description
Putative Vacuolar protein sorting-associated protein 35 [Source:GMGC_GENE;Acc:GSMUA_Achr4G17490_001]
Coordinates
chr4:+:17292132..17317137
Molecular Weight (calculated)
89520.8 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.220
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPDAAAADE EKCLADGMGR LQHNAFYMHR ALDSNNLKDA LRYAGQMLSE LRTSSLSPHK YYELYMRAFD ELRKVEMFFV EETKRGSYSV TDLYELVQHA
101: ANILPRLYLL CTVGSVYIKS KEAPTKDVLK DLVEMCRGIQ HPVRGLFLRS YLSQISRDKL PDIGSEFEGG ANTDNDAIEF VLQNFTEMNK LWVRMQYQGP
201: TGEKAKRGKE RSELRDLVGK NLHVLSQLEG VDLDMYKETV LPRILEQVVN CKDELAQHYL MDCIIQVFPD EYHLQTLETL LSAFPQLQPT VDIKTVLSLL
301: MDRLSNYAVS STEVLPEFLQ AEAFAKLNSA VGEVIEAQVD MPISGVITLY VSLLTFTLRI HPDRLDYTDQ ILGACVQRLS GKTKLEDSKA TKQIIALLSA
401: PLEKYKDIST ALNLPNYPRV MDHLDNATNK VMSAIIIQNI MKNNTCISTA DKVDTLFELI KGLVKETDEA QDDELDEEDF KEEQNSVARL IHMLCTDDAE
501: EMFKIICTVR KHILLGGPKR LAFTVPPLVF SALKLLRHLR NQDGDVNGQE VSVTQKKIFQ LLHQTIEALS SVPSPELALR LYLQCAEAAN DCGLEPVSYE
601: FLTQAFILYE EEMADSKVQV TAIHLIIGTL QRMNVFGIEN RDTLTHKATG YSAKLLKKPD QCRAVYACSH LFWVNEQDGV KDGERVLLCL KRALRIANAA
701: QQMNATRGSS GHVTLFIEML NKYLYFLEKG NPQITSSVIH DLIDHIRTEI QSDNTTSDPS DNAFFSSTMR YIEFHKQKGG SISESYEQIK V
101: ANILPRLYLL CTVGSVYIKS KEAPTKDVLK DLVEMCRGIQ HPVRGLFLRS YLSQISRDKL PDIGSEFEGG ANTDNDAIEF VLQNFTEMNK LWVRMQYQGP
201: TGEKAKRGKE RSELRDLVGK NLHVLSQLEG VDLDMYKETV LPRILEQVVN CKDELAQHYL MDCIIQVFPD EYHLQTLETL LSAFPQLQPT VDIKTVLSLL
301: MDRLSNYAVS STEVLPEFLQ AEAFAKLNSA VGEVIEAQVD MPISGVITLY VSLLTFTLRI HPDRLDYTDQ ILGACVQRLS GKTKLEDSKA TKQIIALLSA
401: PLEKYKDIST ALNLPNYPRV MDHLDNATNK VMSAIIIQNI MKNNTCISTA DKVDTLFELI KGLVKETDEA QDDELDEEDF KEEQNSVARL IHMLCTDDAE
501: EMFKIICTVR KHILLGGPKR LAFTVPPLVF SALKLLRHLR NQDGDVNGQE VSVTQKKIFQ LLHQTIEALS SVPSPELALR LYLQCAEAAN DCGLEPVSYE
601: FLTQAFILYE EEMADSKVQV TAIHLIIGTL QRMNVFGIEN RDTLTHKATG YSAKLLKKPD QCRAVYACSH LFWVNEQDGV KDGERVLLCL KRALRIANAA
701: QQMNATRGSS GHVTLFIEML NKYLYFLEKG NPQITSSVIH DLIDHIRTEI QSDNTTSDPS DNAFFSSTMR YIEFHKQKGG SISESYEQIK V
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.