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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 19502382
extracellular: 24083427
plasma membrane: 28056797
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os01t0920100-01
Os02t0733400-00
Os03t0319300-01
Os03t0801600-01
Os04t0380200-01
Os05t0491000-01
Os05t0491100-01
Os06t0256800-01
Os07t0687200-02
Os11t0147800-01
Os12t0145100-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Os02t0733400-00 AT3G17950.1 15618630
AT1G48480.1 Os06t0256800-01 AT3G17950.1 15618630
AT1G48480.1 Os01t0920100-01 AT3G27210.1 15618630
AT1G48480.1 Os04t0380200-01 AT3G27210.1 15618630
AT3G02880.1 Os01t0267900-01 AT2G41090.1 17360592
AT3G02880.1 Os01t0279300-01 AT2G41090.1 17360592
AT3G02880.1 Os01t0810300-01 AT2G41090.1 17360592
AT3G02880.1 Os03t0319300-01 AT2G41090.1 17360592
AT3G02880.1 Os05t0491000-01 AT2G41090.1 17360592
AT3G02880.1 Os05t0491100-01 AT2G41090.1 17360592
AT3G02880.1 Os07t0687200-02 AT2G41090.1 17360592
AT3G02880.1 Os12t0603800-00 AT2G41090.1 17360592
AT3G02880.1 Os01t0267900-01 AT5G21274.1 17360592
AT3G02880.1 Os01t0279300-01 AT5G21274.1 17360592
AT3G02880.1 Os01t0810300-01 AT5G21274.1 17360592
AT3G02880.1 Os03t0319300-01 AT5G21274.1 17360592
AT3G02880.1 Os05t0491000-01 AT5G21274.1 17360592
AT3G02880.1 Os05t0491100-01 AT5G21274.1 17360592
AT3G02880.1 Os07t0687200-02 AT5G21274.1 17360592
AT3G02880.1 Os12t0603800-00 AT5G21274.1 17360592
AT3G17840.1 Os02t0733400-00 AT3G17950.1 15618630
AT3G17840.1 Os06t0256800-01 AT3G17950.1 15618630
AT3G17840.1 Os01t0920100-01 AT3G27210.1 15618630
AT3G17840.1 Os04t0380200-01 AT3G27210.1 15618630
AT3G17840.1 Os03t0801600-01 AT3G51310.1 15618630
AT3G17840.1 Os11t0147800-01 AT5G19140.1 15618630
AT3G17840.1 Os12t0145100-01 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G344900.1 Wheat plasma membrane 80.42 80.66
TraesCS2D01G325900.1 Wheat plasma membrane 80.57 80.57
KXG26481 Sorghum plasma membrane 80.87 80.51
TraesCS2A01G337000.1 Wheat plasma membrane 80.42 80.42
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 80.27 79.32
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 68.01 74.1
PGSC0003DMT400036789 Potato cytosol 28.7 59.81
Os03t0712400-02 Rice plasma membrane 19.73 58.67
GSMUA_Achr10P... Banana plasma membrane 45.44 52.78
VIT_14s0006g01080.t01 Wine grape plasma membrane 48.88 51.17
GSMUA_Achr2P21610_001 Banana plasma membrane 46.04 50.91
GSMUA_Achr3P02160_001 Banana plasma membrane 36.17 50.31
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 42.15 50.09
KRH60559 Soybean endoplasmic reticulum 48.58 49.54
Bra021277.1-P Field mustard plasma membrane 46.64 49.37
CDY61284 Canola plasma membrane 46.64 49.37
KRH41871 Soybean endoplasmic reticulum 47.83 49.31
CDY67567 Canola plasma membrane 42.9 49.23
Os03t0223000-02 Rice plasma membrane 49.18 48.74
CDX92167 Canola plasma membrane 45.44 48.72
CDX95816 Canola plasma membrane 42.9 48.64
GSMUA_Achr7P11160_001 Banana plasma membrane 38.56 48.31
Solyc11g011020.1.1 Tomato nucleus 46.34 48.29
Solyc06g068910.2.1 Tomato plasma membrane 45.74 48.27
PGSC0003DMT400040459 Potato plasma membrane 46.34 47.91
Bra022250.1-P Field mustard plasma membrane 45.14 47.86
VIT_17s0000g02010.t01 Wine grape plasma membrane 47.83 47.62
PGSC0003DMT400074103 Potato plasma membrane 46.04 47.53
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 25.41 47.35
KRH48661 Soybean nucleus 48.13 47.08
Bra014140.1-P Field mustard plasma membrane 44.69 46.87
Solyc03g118510.2.1 Tomato nucleus 46.19 46.75
AT3G17840.1 Thale cress plasma membrane 45.14 46.68
CDX77309 Canola plasma membrane 44.84 46.44
CDY41827 Canola plasma membrane 44.84 46.37
AT1G48480.1 Thale cress plasma membrane 45.29 46.26
Bra021408.1-P Field mustard plasma membrane 41.7 45.81
Bra008611.1-P Field mustard plasma membrane 42.15 45.7
Bra023574.1-P Field mustard plasma membrane 41.85 45.68
CDX85498 Canola plasma membrane 41.85 45.68
CDY38103 Canola plasma membrane 41.7 45.51
KRH17350 Soybean extracellular 42.45 45.51
CDX69441 Canola plasma membrane 42.0 45.47
CDY49655 Canola plasma membrane 41.85 45.38
Os05t0588300-01 Rice cytosol, mitochondrion 13.75 45.32
KRH39040 Soybean plasma membrane 44.1 45.11
CDY28719 Canola plasma membrane 40.66 45.03
CDY51524 Canola plasma membrane 41.7 45.0
KRH72980 Soybean extracellular 41.11 44.93
AT5G16590.1 Thale cress plasma membrane 41.85 44.8
Bra040609.1-P Field mustard plasma membrane 41.7 44.78
Os09t0400500-01 Rice plasma membrane 43.05 44.44
AT3G02880.1 Thale cress plasma membrane 40.96 43.7
Os05t0480400-01 Rice plasma membrane 41.41 43.42
Os01t0133900-00 Rice extracellular 8.07 42.86
Os07t0681100-01 Rice plasma membrane 40.36 42.19
Os01t0607900-01 Rice plasma membrane 43.05 42.11
Os08t0427600-00 Rice golgi, plasma membrane 28.1 41.96
Os03t0332900-01 Rice plasma membrane 39.76 41.96
Os01t0711200-01 Rice plasma membrane 33.48 34.15
Os12t0145900-01 Rice golgi, plasma membrane 38.42 32.41
Os04t0649700-01 Rice plasma membrane 29.75 28.03
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4336071ProteinID:BAF14921.1
ProteinID:BAS89570.1ProteinID:CAE76007.1ProteinID:EAZ30995.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfEnsemblPlantsGene:Os04g0463000EnsemblPlants:Os04t0463000-01PFAM:PF00069PFAM:PF08263
ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF45InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
UniProt:Q6MWE1SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00002255DB
RefSeq:XP_015634355.1SEG:seg::::
Description
Serine/threonine protein kinase domain containing protein. (Os04t0463000-01)
Coordinates
chr4:-:23120224..23122721
Molecular Weight (calculated)
70358.1 Da
IEP (calculated)
8.853
GRAVY (calculated)
0.080
Length
669 amino acids
Sequence
(BLAST)
001: MLPPPAAAAA ALLLLLALSA GANDIASDAA ALQAFIAPFG SATVSWNTSQ PTCSWTGVVC SGGRVVEVHL PGVGLRGNVP VGALGGLDKL AVLSLRYNAL
101: SGPLPSDLAK CAELRVINLQ SNHFSGELPP EILALPALTQ LNLAENRFSG RIPASIAKNG RLQLLYLDGN LLTGELPNVN MPLLTSFNVS FNNLTGGIPS
201: GLSGMPATSF LGMSLCGKPL AACRTPISIP PSQAPALSPE GAVSAVGRGR GGRRLAGGAI AGIVIGCALG FLLVAGVLVL ACGALQRKPR PHHSRDVAAE
301: LALHSKEAMS PSVYTPRVSD ARPPPPPAAV VPAIQPAVAA NVAGKKKLFF FGRVPRPYDL EDLLRASAEV LGKGTYGTTY KAALETGPVV AVKRLKETSL
401: PEREFRDKVA AIGGLDHPNV VPLQAYYFSK DEKLMVYEFV AMGSLSSMLH GNRGSGRSPL LWESRRRIAL ASARGLEYIH ATGSKVVHGN IKSSNVLLSR
501: SSVDARVADH GLAHLVGPAG APSSRVAGYR APEVVADPWR LSQKADVYSF GVLLLELLTG KAPTHAVLHD DEGVDLPRWA RSVVREEWTS EVFDTELLRH
601: PGAEDEMVEM LRLAMDCTVT VPDQRPAMPE IVVRIEQLGG AGSARTARSV SMDDADDRPL RPAGSTRES
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.