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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 18260611
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG27266 Sorghum plasma membrane 80.28 81.31
Zm00001d002068_P001 Maize plasma membrane 79.15 80.17
TraesCS2B01G540400.2 Wheat plasma membrane 77.61 78.71
TraesCS2D01G513900.1 Wheat plasma membrane 77.46 78.57
TraesCS2A01G512500.1 Wheat plasma membrane 77.61 78.05
HORVU2Hr1G113540.1 Barley plastid 65.21 76.15
GSMUA_Achr4P09880_001 Banana plasma membrane 51.27 60.26
GSMUA_Achr7P20790_001 Banana plasma membrane 47.32 57.24
GSMUA_Achr10P... Banana golgi, plasma membrane 49.44 54.59
CDY22372 Canola cytosol 22.68 54.58
CDX71536 Canola cytosol 22.68 54.58
Bra033656.1-P Field mustard cytosol 22.54 54.24
GSMUA_Achr9P25250_001 Banana plastid 48.31 53.1
VIT_18s0001g10070.t01 Wine grape plasma membrane 45.35 48.64
KRH04550 Soybean plasma membrane 44.23 48.16
KRH57812 Soybean golgi, plasma membrane, plastid 43.24 47.67
VIT_07s0031g00120.t01 Wine grape plasma membrane 44.37 46.94
Solyc04g078590.2.1 Tomato plasma membrane 42.96 45.66
PGSC0003DMT400020520 Potato plasma membrane 42.68 45.16
PGSC0003DMT400025493 Potato plasma membrane 42.25 45.11
CDX81336 Canola plasma membrane 39.58 45.1
Solyc02g093100.2.1 Tomato plasma membrane 41.97 44.74
AT5G67200.1 Thale cress plasma membrane 40.85 43.35
AT5G43020.1 Thale cress plasma membrane 40.28 42.75
KRH61335 Soybean plasma membrane 43.66 42.58
CDY01430 Canola plasma membrane 40.99 42.54
Bra012141.1-P Field mustard plasma membrane 40.99 42.54
CDX83117 Canola plasma membrane 38.59 41.83
CDX68581 Canola plasma membrane 38.17 41.5
KRH52034 Soybean cytosol, plasma membrane, plastid 30.28 41.27
Bra029997.1-P Field mustard plastid 27.61 40.08
AT3G50230.2 Thale cress plasma membrane 37.46 39.58
CDX71537 Canola extracellular 15.21 37.89
Os01t0607900-01 Rice plasma membrane 30.85 32.02
Os03t0332900-01 Rice plasma membrane 28.45 31.86
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 16.06 31.75
Os08t0427600-00 Rice golgi, plasma membrane 20.0 31.7
Os03t0712400-02 Rice plasma membrane 10.0 31.56
Os07t0681100-01 Rice plasma membrane 27.89 30.94
Os05t0480400-01 Rice plasma membrane 27.61 30.72
Os09t0400500-01 Rice plasma membrane 27.32 29.94
Os04t0463000-01 Rice plasma membrane 28.03 29.75
Os03t0223000-02 Rice plasma membrane 27.89 29.33
Os05t0588300-01 Rice cytosol, mitochondrion 8.31 29.06
Os01t0711200-01 Rice plasma membrane 26.62 28.81
Os12t0145900-01 Rice golgi, plasma membrane 29.3 26.23
Os01t0133900-00 Rice extracellular 4.37 24.6
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4337221EMBL:AK100096
ProteinID:BAF15999.1ProteinID:BAS91345.1ProteinID:CAE04495.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
EnsemblPlantsGene:Os04g0649700EnsemblPlants:Os04t0649700-01PFAM:PF00069PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF39
InterPro:Prot_kinase_domUniProt:Q7XMQ6SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI00001B17DFRefSeq:XP_015634377.1SEG:seg:::
Description
Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-01);Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-02);Similar to H0212B02.5 protein. (Os04t0649700-03);Similar to H0212B02.5 protein. (Os04t0649700-04);Similar to H0212B02.5 protein. (Os04t0649700-05)
Coordinates
chr4:-:33109823..33113326
Molecular Weight (calculated)
75649.9 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.045
Length
710 amino acids
Sequence
(BLAST)
001: MRHRLRLLLV VLVAAAYAAG DVASSYSQPT LPAVPPVQAV RPPPAAVGGG SHSQPTFPPR APVRAVPPPA TLVSTATPGA LLAAFLAKAD PSAHLRFPLA
101: VSPCSHPAVS CSADGQITRL VLESSGLNGT FAPATLSRLV ELRVLSLKSN ALHGPIPDLS PLENLKALFL AGNRFSGPFP ASVASLRRLR SIDLAGNRLS
201: GALPPGIEVA FPHLTFLRLD ANHFNGSLPA WNQSSLKLLN VSYNNFSGPV PVTPVMAQMG AAAFAGNPEL CGEVLRRECR GSHLLFFHGP GNNGSAAPPV
301: QSAAATGDGP QRDDISLPDS STPRSRKLRR RAAIAVAATA AAFVAVLLLC AMIAMKRGKK RRRPSSAAYP SPKKSAAMSE VSRDNTDLGY VECVPDEETA
401: AMMMPEEKAR RLERSGCLTF CAGEGASYSL EQLMRASAEV LGRGSVGTTY KAVLDGRLVV IVKRLDAAKI GAAALEAEAF EQNMDAVGRL RHPNLVSLRA
501: FFQAKEERLL VYDYQPNGSL YSLIHGSRSS RAKPLHWTSC LKIAEDIGQG LAYIHQASRL VHGNIKSSNV LLGSDFEACL TDNCLAFLLE SSEVKDDAAY
601: RAPENMKSNR RLTPKSDIYA FGILLLELIS GKPPLQHSVL VATNLQTYVQ SARDDGVDVE RLSMIVDIAS ACVRSSPESR PTAWQVLKMI QEVKEADTAG
701: DNDSDLTSNS
Best Arabidopsis Sequence Match ( AT5G67200.1 )
(BLAST)
001: MTLNFFLPFF FFFILLRVSA GAEPNYFNSL LPSDAVALLS FKSTADLDNK LLYSLTERYD YCQWRGVKCA QGRIVRLVLS GVGLRGYFSS ATLSRLDQLR
101: VLSLENNSLF GPIPDLSHLV NLKSLFLSRN QFSGAFPPSI LSLHRLMILS ISHNNFSGSI PSEINALDRL TSLNLDFNRF NGTLPSLNQS FLTSFNVSGN
201: NLTGVIPVTP TLSRFDASSF RSNPGLCGEI INRACASRSP FFGSTNKTTS SEAPLGQSAQ AQNGGAVVIP PVVTKKKGKE SGLVLGFTAG LASLIVLGLC
301: LVVFSLVIKK RNDDGIYEPN PKGEASLSQQ QQSQNQTPRT RAVPVLNSDT ESQKREKEVQ FQETEQRIPN SGNLVFCGES RSQGMYTMEQ LMRASAELLG
401: RGSVGITYKA VLDNQLIVTV KRLDAAKTAV TSEEAFENHM EIVGGLRHTN LVPIRSYFQS NGERLIIYDY HPNGSLFNLI HGSRSSRAKP LHWTSCLKIA
501: EDVAQGLYYI HQTSSALVHG NLKSTNILLG QDFEACLTDY CLSVLTDSSS ASPDDPDSSS YKAPEIRKSS RRPTSKCDVY SFGVLIFELL TGKNASRHPF
601: MAPHDMLDWV RAMREEEEGT EDNRLGMMTE TACLCRVTSP EQRPTMRQVI KMIQEIKESV MAEENDPFR
Arabidopsis Description
Probable inactive receptor kinase At5g67200 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y06]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.