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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os01t0920100-01
Os02t0733400-00
Os03t0319300-01
Os03t0801600-01
Os04t0380200-01
Os05t0491000-01
Os05t0491100-01
Os06t0256800-01
Os07t0687200-02
Os11t0147800-01
Os12t0145100-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Os02t0733400-00 AT3G17950.1 15618630
AT1G48480.1 Os06t0256800-01 AT3G17950.1 15618630
AT1G48480.1 Os01t0920100-01 AT3G27210.1 15618630
AT1G48480.1 Os04t0380200-01 AT3G27210.1 15618630
AT3G02880.1 Os01t0267900-01 AT2G41090.1 17360592
AT3G02880.1 Os01t0279300-01 AT2G41090.1 17360592
AT3G02880.1 Os01t0810300-01 AT2G41090.1 17360592
AT3G02880.1 Os03t0319300-01 AT2G41090.1 17360592
AT3G02880.1 Os05t0491000-01 AT2G41090.1 17360592
AT3G02880.1 Os05t0491100-01 AT2G41090.1 17360592
AT3G02880.1 Os07t0687200-02 AT2G41090.1 17360592
AT3G02880.1 Os12t0603800-00 AT2G41090.1 17360592
AT3G02880.1 Os01t0267900-01 AT5G21274.1 17360592
AT3G02880.1 Os01t0279300-01 AT5G21274.1 17360592
AT3G02880.1 Os01t0810300-01 AT5G21274.1 17360592
AT3G02880.1 Os03t0319300-01 AT5G21274.1 17360592
AT3G02880.1 Os05t0491000-01 AT5G21274.1 17360592
AT3G02880.1 Os05t0491100-01 AT5G21274.1 17360592
AT3G02880.1 Os07t0687200-02 AT5G21274.1 17360592
AT3G02880.1 Os12t0603800-00 AT5G21274.1 17360592
AT3G17840.1 Os02t0733400-00 AT3G17950.1 15618630
AT3G17840.1 Os06t0256800-01 AT3G17950.1 15618630
AT3G17840.1 Os01t0920100-01 AT3G27210.1 15618630
AT3G17840.1 Os04t0380200-01 AT3G27210.1 15618630
AT3G17840.1 Os03t0801600-01 AT3G51310.1 15618630
AT3G17840.1 Os11t0147800-01 AT5G19140.1 15618630
AT3G17840.1 Os12t0145100-01 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G210800.1 Wheat plasma membrane 71.3 71.3
TraesCS5B01G202900.1 Wheat plasma membrane 71.76 71.21
TraesCS5A01G205500.1 Wheat plasma membrane 70.68 70.35
HORVU0Hr1G012920.2 Barley cytosol 54.78 69.61
Zm00001d020403_P001 Maize plasma membrane 67.9 68.64
KXG35590 Sorghum plasma membrane 67.13 66.62
Os08t0427600-00 Rice golgi, plasma membrane 39.97 57.81
GSMUA_Achr3P02160_001 Banana plasma membrane 36.42 49.06
GSMUA_Achr10P... Banana plasma membrane 42.44 47.74
CDY67567 Canola plasma membrane 42.13 46.83
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 40.59 46.71
GSMUA_Achr2P21610_001 Banana plasma membrane 43.52 46.61
Bra021277.1-P Field mustard plasma membrane 45.37 46.52
PGSC0003DMT400036789 Potato cytosol 22.99 46.42
CDY61284 Canola plasma membrane 45.22 46.36
CDX92167 Canola plasma membrane 44.29 45.99
AT3G17840.1 Thale cress plasma membrane 45.68 45.75
VIT_14s0006g01080.t01 Wine grape plasma membrane 45.06 45.7
CDX95816 Canola plasma membrane 41.51 45.59
Bra022250.1-P Field mustard plasma membrane 43.98 45.17
Os03t0223000-02 Rice plasma membrane 46.3 44.44
CDY28719 Canola plasma membrane 41.2 44.21
CDY51524 Canola plasma membrane 42.13 44.03
KRH17350 Soybean extracellular 42.28 43.91
Bra040609.1-P Field mustard plasma membrane 42.13 43.82
Solyc11g011020.1.1 Tomato nucleus 43.36 43.77
VIT_17s0000g02010.t01 Wine grape plasma membrane 45.37 43.75
Bra014140.1-P Field mustard plasma membrane 43.06 43.73
CDX77309 Canola plasma membrane 43.52 43.65
KRH41871 Soybean endoplasmic reticulum 43.67 43.61
Os03t0712400-02 Rice plasma membrane 15.12 43.56
AT1G48480.1 Thale cress plasma membrane 43.98 43.51
GSMUA_Achr7P11160_001 Banana plasma membrane 35.8 43.45
PGSC0003DMT400040459 Potato plasma membrane 43.36 43.43
CDY41827 Canola plasma membrane 43.36 43.43
Solyc06g068910.2.1 Tomato plasma membrane 42.28 43.22
KRH60559 Soybean endoplasmic reticulum 43.67 43.14
Os04t0463000-01 Rice plasma membrane 44.44 43.05
Bra021408.1-P Field mustard plasma membrane 40.12 42.69
PGSC0003DMT400074103 Potato plasma membrane 42.44 42.44
KRH72980 Soybean extracellular 39.97 42.32
AT3G02880.1 Thale cress plasma membrane 40.74 42.11
Bra008611.1-P Field mustard plasma membrane 39.81 41.82
Solyc03g118510.2.1 Tomato nucleus 42.59 41.75
CDX69441 Canola plasma membrane 39.81 41.75
CDY49655 Canola plasma membrane 39.66 41.65
Bra023574.1-P Field mustard plasma membrane 39.35 41.6
CDX85498 Canola plasma membrane 39.35 41.6
Os05t0588300-01 Rice cytosol, mitochondrion 12.96 41.38
CDY38103 Canola plasma membrane 39.04 41.27
AT5G16590.1 Thale cress plasma membrane 39.51 40.96
Os05t0480400-01 Rice plasma membrane 39.81 40.44
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 22.07 39.83
KRH48661 Soybean nucleus 41.82 39.62
Os03t0332900-01 Rice plasma membrane 38.58 39.43
Os01t0607900-01 Rice plasma membrane 41.36 39.18
KRH39040 Soybean plasma membrane 39.2 38.84
Os07t0681100-01 Rice plasma membrane 37.96 38.44
Os01t0133900-00 Rice extracellular 7.41 38.1
Os01t0711200-01 Rice plasma membrane 33.95 33.54
Os12t0145900-01 Rice golgi, plasma membrane 38.43 31.4
Os04t0649700-01 Rice plasma membrane 29.94 27.32
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4346994EMBL:AK243495
ProteinID:BAF25029.1ProteinID:BAT07965.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptEnsemblPlantsGene:Os09g0400500EnsemblPlants:Os09t0400500-01
PFAM:PF00069PFAM:PF00560PFAM:PF08263PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF14
InterPro:Prot_kinase_domUniProt:Q0J1Z3SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0000DD970ARefSeq:XP_015610773.1SEG:seg:::
Description
Serine/threonine protein kinase domain containing protein. (Os09t0400500-01)
Coordinates
chr9:-:14007882..14009971
Molecular Weight (calculated)
67845.2 Da
IEP (calculated)
8.391
GRAVY (calculated)
0.007
Length
648 amino acids
Sequence
(BLAST)
001: MPRAAVGVVV ALLWCAALIG GGAGAGQDLA ADTAALLAFR DAVGPRLPWA SSSSSPCGWR GVRCDAGGGR VVALQLPGAK LVGRVPTGTV GNLTALRTLS
101: LRSNALSGGI PVDIGNCGEL RALYLQGNQL AGEVPEGFFS LLLLQRLDLS RNRITGSISP EFNKLRRLAT LYLENNGLNG TLPADLDLPK LQLFNVSNND
201: QLTGAVPASL AGKPASAFSG TGLCGGPLSP CTNTSPPSPS PSPSPPIPPP PAASQDSKSS KLSGGAIAGI AVGAAAALLV ALAVIVLLCF KRGRRKEGRP
301: ADVDEDASPV SVTVARTDKV EVKRSRSRPS QQTTTASGAK KLVFVGGEPD VPYDLDTLLH ASAEVLGKGW LGTTYRATLE GGAAVVAVKR LREAPIAERE
401: FRDSVAELAA LRHENLAPLR AYFYSRDEKL LVSDFVGAGA LSSLLHGGGG AVRRARLGFT SRARIALAAA RGVAFIHGAG SSHGNIKSSN IVVNRTHDGA
501: YVTDHGLAQL LGAAVPLKRV TGYRAPEVSD LRRASREADV YSFGVVLLEM LTGRPPANAV PGFDGVDLPQ WVRAVVHEEW TAEVFDASIA DEAHAEEEMM
601: RLLKLAVECT EQRPERRPTM AEVAARIEHI VDTVIRNADV DDFDSVSQ
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.