CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
golgi 3
plasma membrane 7
endoplasmic reticulum 3
vacuole 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88180
EER93269
EES01631
EES01966
EES05571
EES09201
EES09256
EES12001
EES16322
KXG22952
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48480.1	EER88180	AT3G17950.1	15618630
AT1G48480.1	EES05571	AT3G17950.1	15618630
AT1G48480.1	EES01966	AT3G27210.1	15618630
AT1G48480.1	EES12001	AT3G27210.1	15618630
AT3G02880.1	EES01631	AT2G41090.1	17360592
AT3G02880.1	EES09201	AT2G41090.1	17360592
AT3G02880.1	EES16322	AT2G41090.1	17360592
AT3G02880.1	OQU78227	AT2G41090.1	17360592
AT3G02880.1	EES01631	AT5G21274.1	17360592
AT3G02880.1	EES09201	AT5G21274.1	17360592
AT3G02880.1	EES16322	AT5G21274.1	17360592
AT3G02880.1	OQU78227	AT5G21274.1	17360592
AT3G17840.1	EER88180	AT3G17950.1	15618630
AT3G17840.1	EES05571	AT3G17950.1	15618630
AT3G17840.1	EES01966	AT3G27210.1	15618630
AT3G17840.1	EES12001	AT3G27210.1	15618630
AT3G17840.1	EER93269	AT3G51310.1	15618630
AT3G17840.1	EES09256	AT5G19140.1	15618630
AT3G17840.1	KXG22952	AT5G19140.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020403_P001	Maize	plasma membrane	84.38	85.96
TraesCS5D01G210800.1	Wheat	plasma membrane	67.69	68.21
TraesCS5B01G202900.1	Wheat	plasma membrane	67.84	67.84
TraesCS5A01G205500.1	Wheat	plasma membrane	67.38	67.59
Os09t0400500-01	Rice	plasma membrane	66.62	67.13
HORVU0Hr1G012920.2	Barley	cytosol	52.07	66.67
EES15012	Sorghum	plasma membrane	54.36	54.2
PGSC0003DMT400036789	Potato	cytosol	24.35	49.53
GSMUA_Achr3P02160_001	Banana	plasma membrane	35.38	48.02
Bra021277.1-P	Field mustard	plasma membrane	45.02	46.52
CDY61284	Canola	plasma membrane	45.02	46.52
CDY67567	Canola	plasma membrane	41.35	46.31
GSMUA_Achr2P21610_001	Banana	plasma membrane	42.27	45.62
CDX92167	Canola	plasma membrane	43.49	45.51
CDX95816	Canola	plasma membrane	41.04	45.42
VIT_14s0006g01080.t01	Wine grape	plasma membrane	44.41	45.38
AT3G17840.1	Thale cress	plasma membrane	44.72	45.13
Bra022250.1-P	Field mustard	plasma membrane	43.49	45.01
GSMUA_Achr10P...	Banana	plasma membrane	39.66	44.97
CDX77309	Canola	plasma membrane	44.41	44.89
KRH41871	Soybean	endoplasmic reticulum	44.41	44.68
Bra014140.1-P	Field mustard	plasma membrane	43.49	44.51
EER95247	Sorghum	plasma membrane	45.94	44.51
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	38.28	44.41
CDY41827	Canola	plasma membrane	43.95	44.36
KRH60559	Soybean	endoplasmic reticulum	44.1	43.9
Solyc03g118510.2.1	Tomato	nucleus	44.26	43.72
Solyc11g011020.1.1	Tomato	nucleus	42.88	43.61
Solyc06g068910.2.1	Tomato	plasma membrane	42.27	43.53
VIT_17s0000g02010.t01	Wine grape	plasma membrane	44.56	43.3
PGSC0003DMT400040459	Potato	plasma membrane	42.57	42.97
AT1G48480.1	Thale cress	plasma membrane	43.03	42.9
PGSC0003DMT400074103	Potato	plasma membrane	42.42	42.75
KXG26481	Sorghum	plasma membrane	43.03	41.82
GSMUA_Achr7P11160_001	Banana	plasma membrane	34.15	41.76
EER90996	Sorghum	plasma membrane	44.41	41.67
KRH17350	Soybean	extracellular	39.36	41.19
CDY51524	Canola	plasma membrane	39.05	41.13
Bra040609.1-P	Field mustard	plasma membrane	39.05	40.93
EES19702	Sorghum	plasma membrane	39.66	40.92
CDY28719	Canola	plasma membrane	37.83	40.89
CDY38103	Canola	plasma membrane	38.13	40.62
Bra008611.1-P	Field mustard	plasma membrane	38.28	40.52
CDY49655	Canola	plasma membrane	38.28	40.52
CDX85498	Canola	plasma membrane	37.98	40.46
Bra023574.1-P	Field mustard	plasma membrane	37.98	40.46
KRH72980	Soybean	extracellular	37.83	40.36
CDX69441	Canola	plasma membrane	38.13	40.29
Bra021408.1-P	Field mustard	plasma membrane	37.52	40.23
AT5G16590.1	Thale cress	plasma membrane	38.13	39.84
AT3G02880.1	Thale cress	plasma membrane	37.83	39.39
EES01662	Sorghum	plasma membrane	38.28	39.37
KRH48661	Soybean	nucleus	41.04	39.18
KRH39040	Soybean	plasma membrane	39.05	38.99
KXG31530	Sorghum	plasma membrane	39.82	38.98
KXG36955	Sorghum	plasma membrane	38.13	38.97
EES03251	Sorghum	plasma membrane	40.89	38.7
OQU92655	Sorghum	plasma membrane	36.6	37.58
EES18787	Sorghum	plasma membrane	39.05	36.96
EES02541	Sorghum	plasma membrane	38.44	35.35
OQU82868	Sorghum	plasma membrane	36.91	31.3
KXG33230	Sorghum	plasma membrane	31.24	30.91
KXG27266	Sorghum	plasma membrane	32.31	30.1
EES07820	Sorghum	plasma membrane	32.16	29.91

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8056236	UniProt:C5XC53
ProteinID:EER98872.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	EnsemblPlants:KXG35590	ProteinID:KXG35590	ProteinID:KXG35590.1	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	ProteinID:OQU89466.1	ProteinID:OQU89467.1	PFAM:PF00069	PFAM:PF08263
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF14	InterPro:Prot_kinase_dom	EnsemblPlantsGene:SORBI_3002G195800	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83F5E	RefSeq:XP_002462351.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:58417953..58421597

Molecular Weight (calculated)

68812.6 Da

IEP (calculated)

7.433

GRAVY (calculated)

0.085

Length

653 amino acids

Sequence
(BLAST)

001: MRWAPGASAS AGRAVYVVLV AALWCASLVP RAAAQADLAA DRAALLAFRA AVGPRLPWDA AAPCGWRGVT CDAAGARVVA LKLPGESLIG AVPLGTIGNL
101: TALRALSLRL NALSGGIPAD IGSCAELRYL YLQGNRLDGQ IPEGFFGLRL LQRLDLSNNR IAGEVSPDFN RLQRLATLYL ENNSLNGTLP SDLDLPKLQL
201: FNVSGNNFTG PVPDSLVRMP ASAFDGTGLC GGPLAPCPTP PSPPPAPAAA NGSNSRKLST GAIAGIAAGG AVAFLVLIAV IFFLCFRCHK TIAEKSAAAA
301: ADGDLDASPE SVTVASMDKK SGTRRSSQAT AAGNGKKLVF LGAAPDAPYD LESLLHASAE VIGKGWLGTT YRAMLEGGAA TVAVKRLRAA PIPEREFRDK
401: VTALGALRHE NLVPVRAYFY SREEKLIVYD FVGAGSLCSL LHGSSSSGAG ASPARLDFAA RARIALAAAR GVAFIHDAGD RARSCHGNIK STNVLVTETR
501: DGAYVTDHGI LQLVGAHVPL KRVTGYRAPE VTDPRRASQE TDVYAFGVLL LELLTGKPPV NSVPGSTDGV NLPMWVRTVV QEEWTAEVFD ASIAIEERVE
601: EEMMQLLRLA VDCTDDRPDR RPRMAEVVAR IDLIVESALM KTNTDDDFHS ISP

Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)

001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD

Arabidopsis Description

RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.