Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012514_P001 Maize extracellular 92.91 93.8
Zm00001d043071_P001 Maize plasma membrane 94.49 89.55
Os01t0819100-01 Rice cytosol, extracellular, plasma membrane 49.61 87.74
TraesCS3B01G374400.1 Wheat plasma membrane 85.98 86.26
HORVU3Hr1G080740.1 Barley plasma membrane 85.51 85.92
TraesCS3D01G336200.1 Wheat plasma membrane 85.04 85.17
TraesCS3A01G342300.1 Wheat plasma membrane 85.04 85.17
EES19702 Sorghum plasma membrane 78.11 78.36
GSMUA_Achr7P21970_001 Banana plasma membrane 57.17 70.35
GSMUA_Achr6P25170_001 Banana plasma membrane 53.86 66.93
GSMUA_AchrUn_... Banana plasma membrane 49.92 64.83
VIT_06s0004g08210.t01 Wine grape plasma membrane 63.31 63.11
PGSC0003DMT400078299 Potato plasma membrane 60.31 60.89
Solyc06g082610.2.1 Tomato plasma membrane 59.53 60.48
CDX88667 Canola plasma membrane 58.74 59.68
KRH72840 Soybean nucleus 61.26 59.48
VIT_08s0040g00060.t01 Wine grape plasma membrane 59.21 59.31
KRH17210 Soybean nucleus 60.79 58.93
Bra006774.1-P Field mustard plasma membrane 60.0 58.62
KRG98109 Soybean mitochondrion 60.94 57.93
KRH00489 Soybean plasma membrane 55.28 57.83
CDY58565 Canola plasma membrane 59.37 57.73
KRH30670 Soybean plasma membrane 60.79 57.53
CDY02808 Canola plastid 38.11 57.48
OQU92655 Sorghum plasma membrane 57.48 57.39
KRH40666 Soybean plasma membrane 54.8 57.33
KXG36955 Sorghum plasma membrane 57.48 57.12
Bra020377.1-P Field mustard plastid 37.8 57.01
PGSC0003DMT400013468 Potato plasma membrane 56.85 56.85
AT3G08680.2 Thale cress plasma membrane 56.69 56.25
CDY32713 Canola plasma membrane 57.48 56.07
Solyc03g095490.2.1 Tomato plastid 56.06 56.06
AT5G58300.1 Thale cress plasma membrane 57.64 55.96
Solyc09g030450.2.1 Tomato plasma membrane 55.75 55.92
KRH53701 Soybean plasma membrane 56.22 55.61
CDY35996 Canola plasma membrane 55.12 55.12
CDY27986 Canola plasma membrane 54.49 54.83
PGSC0003DMT400046218 Potato plasma membrane 56.22 54.75
Bra040054.1-P Field mustard plasma membrane, plastid 54.8 54.55
KRH64226 Soybean plasma membrane 54.96 54.53
PGSC0003DMT400070937 Potato plasma membrane 50.55 54.22
CDX70172 Canola plasma membrane 52.28 53.21
Bra009091.1-P Field mustard plasma membrane 52.28 53.21
CDX98821 Canola plasma membrane 52.6 53.18
Solyc06g048560.1.1 Tomato plasma membrane 49.61 53.12
KRH72555 Soybean plasma membrane 53.7 52.62
KRH16952 Soybean plasma membrane 53.7 52.46
AT5G05160.1 Thale cress plasma membrane 52.13 51.72
GSMUA_Achr11P... Banana plasma membrane 62.99 48.37
KXG31530 Sorghum plasma membrane 49.76 47.38
EER95247 Sorghum plasma membrane 47.24 44.51
EES03251 Sorghum plasma membrane 48.19 44.35
EER90996 Sorghum plasma membrane 44.41 40.52
KXG26481 Sorghum plasma membrane 42.52 40.18
EES18787 Sorghum plasma membrane 42.99 39.57
KXG35590 Sorghum plasma membrane 39.37 38.28
EES15012 Sorghum plasma membrane 38.74 37.56
EES02541 Sorghum plasma membrane 41.26 36.9
KXG33230 Sorghum plasma membrane 35.91 34.55
OQU82868 Sorghum plasma membrane 40.79 33.64
EES07820 Sorghum plasma membrane 35.12 31.77
KXG27266 Sorghum plasma membrane 32.76 29.67
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8055303UniProt:C5XN93
EnsemblPlants:EES01662ProteinID:EES01662ProteinID:EES01662.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_4InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560PFAM:PF07714PFAM:PF08263PFAM:PF12799ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF18InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00369EnsemblPlantsGene:SORBI_3003G336900
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A846E8
RefSeq:XP_002456542.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:66015081..66020418
Molecular Weight (calculated)
69311.8 Da
IEP (calculated)
8.924
GRAVY (calculated)
-0.088
Length
635 amino acids
Sequence
(BLAST)
001: MQHLTVIAFL AASLLIASIP HAKSADLNSD KQALLAFAAS LPHGRKLNWS STTPVCTSWV GVTCTPDKSR VHTLRLPAVG LFGPIPSDTL GKLDALEVLS
101: LRSNRLTVDL PPDVGSIPAL HSLYLQHNNL SGIIPTSLSS SLTFLDLSYN TFDGEIPLKV QNLTQLTALL LQNNSLSGPI PDLQLPKLRH LNLSNNNLSG
201: PIPPSLQRFP SSSFLGNVFL CGFPLEPCFG TAPTPSPVSP PSTNKTKKSF WKKIRTGVLI AIAAVGGVLL LILIITLLIC IFKRKRHTEP TTASSKGKAI
301: AGGRAENPKE DYSSGVQEAE RNKLVFFEGS SYNFDLEDLL RASAEVLGKG SYGTTYKAVL EDGTTVVVKR LKEVVVSKKD FEQQMEIVGR VGQHQNVIPL
401: RAYYYSKDEK LLVFDYVPSG SLAAVLHGNK ASGRAPLNWE TRVKISLDVA RGIAHLHAEG GGKFIHGNIK ASNVLLSQNL DGCVSEFGLA QIMTTPQTAP
501: RLVGYRAPEV LETKKSTQKS DVYSFGVLLL EMLTGKAPLR SPGREDSIEH LPRWVQSVVR EEWTAEVFDV DLLRHPNVED EMVQMLQIAM ACVAIAPEQR
601: PKMEEVIRRI TEIRNSYSSG TRTPLEDKPE TAQAP
Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)
001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV
Arabidopsis Description
Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.