Factsheet for PGSC0003DMT400046218

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g030450.2.1	Tomato	plasma membrane	91.87	94.63
VIT_08s0040g00060.t01	Wine grape	plasma membrane	63.04	64.83
Os01t0819100-01	Rice	cytosol, extracellular, plasma membrane	34.2	62.12
PGSC0003DMT400078299	Potato	plasma membrane	59.82	62.0
PGSC0003DMT400013468	Potato	plasma membrane	59.36	60.94
KRH40666	Soybean	plasma membrane	56.13	60.3
KRH00489	Soybean	plasma membrane	55.98	60.13
GSMUA_AchrUn_...	Banana	plasma membrane	44.63	59.51
GSMUA_Achr3P09720_001	Banana	plasma membrane	53.99	58.96
Os05t0480400-01	Rice	plasma membrane	56.75	57.99
EES19702	Sorghum	plasma membrane	55.98	57.66
GSMUA_Achr6P25170_001	Banana	plasma membrane	44.94	57.34
PGSC0003DMT400070937	Potato	plasma membrane	51.84	57.09
GSMUA_Achr7P21970_001	Banana	plasma membrane	45.09	56.98
Os03t0332900-01	Rice	plasma membrane	55.37	56.94
TraesCS1D01G301400.1	Wheat	vacuole	55.52	56.56
KXG36955	Sorghum	plasma membrane	55.21	56.34
TraesCS1A01G301800.2	Wheat	plasma membrane, vacuole	55.21	56.25
EES01662	Sorghum	plasma membrane	54.75	56.22
Zm00001d038487_P003	Maize	plasma membrane	54.45	55.99
TraesCS1B01G311800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.91	55.94
Zm00001d012514_P001	Maize	extracellular	53.83	55.8
TraesCS4D01G173400.1	Wheat	plasma membrane	54.45	55.73
HORVU3Hr1G080740.1	Barley	plasma membrane	53.99	55.7
Os07t0681100-01	Rice	plasma membrane	54.6	55.62
TraesCS3B01G374400.1	Wheat	plasma membrane	53.99	55.61
TraesCS3D01G336200.1	Wheat	plasma membrane	53.99	55.52
TraesCS3A01G342300.1	Wheat	plasma membrane	53.99	55.52
TraesCS4A01G133400.1	Wheat	plasma membrane	54.14	55.42
HORVU4Hr1G050770.1	Barley	plasma membrane	54.14	55.42
TraesCS4B01G171300.1	Wheat	plasma membrane	53.99	55.26
TraesCS2B01G121100.1	Wheat	plasma membrane	53.68	54.86
HORVU2Hr1G017650.1	Barley	plasma membrane	53.53	54.79
OQU92655	Sorghum	plasma membrane	53.22	54.56
TraesCS2D01G103800.1	Wheat	plasma membrane	53.22	54.47
Zm00001d022432_P001	Maize	plasma membrane	53.07	54.4
TraesCS2A01G104100.1	Wheat	plasma membrane	53.22	54.39
TraesCS1B01G311700.1	Wheat	plasma membrane, plastid	38.19	52.53
PGSC0003DMT400036789	Potato	cytosol	25.77	52.34
Zm00001d043071_P001	Maize	plasma membrane	53.53	52.09
PGSC0003DMT400039213	Potato	plasma membrane	51.84	51.29
PGSC0003DMT400023418	Potato	plasma membrane	46.93	48.96
PGSC0003DMT400032061	Potato	plasma membrane	48.01	48.75
Zm00001d029040_P001	Maize	mitochondrion	52.15	47.22
PGSC0003DMT400040459	Potato	plasma membrane	44.79	45.13
PGSC0003DMT400074103	Potato	plasma membrane	44.79	45.06
PGSC0003DMT400008826	Potato	plasma membrane	40.03	43.21
PGSC0003DMT400037779	Potato	plasma membrane	44.33	42.94
HORVU1Hr1G069510.6	Barley	plasma membrane	41.56	42.21
GSMUA_Achr11P...	Banana	plasma membrane	53.37	42.08
PGSC0003DMT400006944	Potato	plasma membrane	43.4	41.86
PGSC0003DMT400050673	Potato	plasma membrane	36.5	37.42
PGSC0003DMT400020520	Potato	plasma membrane	34.05	33.08
PGSC0003DMT400025493	Potato	plasma membrane	33.44	32.78
PGSC0003DMT400068804	Potato	plasma membrane	36.04	28.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0030312	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M1BIT2	PFAM:PF07714	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400017943
PGSC:PGSC0003DMG400017943	EnsemblPlants:PGSC0003DMT400046218	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF112
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000295AD19	SEG:seg	:	:	:

Description

Nodulation receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017943]

Coordinates

chr00:+:7060370..7064049

Molecular Weight (calculated)

70948.2 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.099

Length

652 amino acids

Sequence
(BLAST)

001: MKLHPIIDLL PLSLFLFLLL FSNVIADLSS DRQALLDFAS AVPHLRNFKW NTNSSICTWH GVSCSSDGTR VVALRLPGIG LYGPIPDNTI GRLDALTTLS
101: LHSNALTGNL PSDITSLPSL RFIFIQQNKF SGEIPSSLSL QLNFIDLSFN SFSGEIPTTI QNLTHLTGLN LQNNSLTGSI PNVNLPRLTQ LNMSNNQLNG
201: SIPPSLAKFS ASSFQGNSLL CGQPLTQCPS FAPSPSPFPS IPPSPLSLTP PSRSPSVLPA SPTIPENHKG KKSLSTRVII GIVAGGVGGI LCLAVLIFLC
301: CMKRYYTKRG VQQRKDFNGG GSPKQTEDFS SGVQAAEKNK LVFFEGCSFN FDLEDLLRAS AEVLGKGSYG TTYKAILEEG TTVVVKRLKE VVVGKREFDQ
401: QMETIGTVDQ HRNVVALRAY YFSKDEKLLV YDHVPAGSLS TRMHGNKDLG RTLDWESRLR IAHGAASGIA HIHAVSGGKL IHGNIKSSNV LLTHDNNGCI
501: SDVGLTPLMG FPTIPSKSAG YRAPEVIETK KCTQKSDVYS FGVLLLELLT GKAPVQPPGH DEVVDLPRWV QSVVREEWTA EVFDVELIKF QNIEDEMVQM
601: LQIAMTCVAN VPETRPDMSQ VVQMIEDIQQ IDSGNRPSSE DNKSRSPTSP TP

Best Arabidopsis Sequence Match ( AT5G58300.2 )
(BLAST)

001: MMQFHFQFYV GPVFTLRPSK GFLSTCLVSF LFVTTTFCSY AIADLNSDRQ ALLAFAASVP HLRRLNWNST NHICKSWVGV TCTSDGTSVH ALRLPGIGLL
101: GPIPPNTLGK LESLRILSLR SNLLSGNLPP DIHSLPSLDY IYLQHNNFSG EVPSFVSRQL NILDLSFNSF TGKIPATFQN LKQLTGLSLQ NNKLSGPVPN
201: LDTVSLRRLN LSNNHLNGSI PSALGGFPSS SFSGNTLLCG LPLQPCATSS PPPSLTPHIS TPPLPPFPHK EGSKRKLHVS TIIPIAAGGA ALLLLITVII
301: LCCCIKKKDK REDSIVKVKT LTEKAKQEFG SGVQEPEKNK LVFFNGCSYN FDLEDLLRAS AEVLGKGSYG TAYKAVLEES TTVVVKRLKE VAAGKREFEQ
401: QMEIISRVGN HPSVVPLRAY YYSKDEKLMV CDYYPAGNLS SLLHGNRGSE KTPLDWDSRV KITLSAAKGI AHLHAAGGPK FSHGNIKSSN VIMKQESDAC
501: ISDFGLTPLM AVPIAPMRGA GYRAPEVMET RKHTHKSDVY SFGVLILEML TGKSPVQSPS RDDMVDLPRW VQSVVREEWT SEVFDIELMR FQNIEEEMVQ
601: MLQIAMACVA QVPEVRPTMD DVVRMIEEIR VSDSETTRPS SDDNSKPKDS NVQV

Arabidopsis Description

Probable inactive receptor kinase At5g58300 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.