Factsheet for PGSC0003DMT400006944

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g008860.2.1	Tomato	plasma membrane	98.67	98.81
VIT_08s0007g04150.t01	Wine grape	plasma membrane	73.22	72.47
CDX84553	Canola	plasma membrane	65.38	67.28
CDX79688	Canola	plasma membrane	63.91	67.08
KRH67820	Soybean	plasma membrane	66.72	66.91
KRH20013	Soybean	plasma membrane	68.05	66.86
Bra023075.1-P	Field mustard	plasma membrane	66.42	66.62
AT2G36570.1	Thale cress	plasma membrane	65.98	66.37
KRG96115	Soybean	plasma membrane	66.57	62.24
KRH32636	Soybean	plasma membrane	66.86	61.5
PGSC0003DMT400036789	Potato	cytosol	24.7	52.02
HORVU5Hr1G063050.3	Barley	plasma membrane	35.95	51.92
TraesCS5B01G130800.1	Wheat	plasma membrane	53.55	48.59
TraesCS5D01G138400.1	Wheat	plasma membrane	53.25	48.32
TraesCS5A01G130900.1	Wheat	plasma membrane	53.11	48.19
Os12t0145900-01	Rice	golgi, plasma membrane	54.29	46.28
OQU82868	Sorghum	plasma membrane	52.51	46.1
HORVU5Hr1G041210.4	Barley	plasma membrane	52.66	45.76
Zm00001d004929_P001	Maize	mitochondrion	51.18	45.11
PGSC0003DMT400078299	Potato	plasma membrane	41.72	44.83
PGSC0003DMT400013468	Potato	plasma membrane	42.01	44.72
PGSC0003DMT400037779	Potato	plasma membrane	44.38	44.58
PGSC0003DMT400046218	Potato	plasma membrane	41.86	43.4
PGSC0003DMT400070937	Potato	plasma membrane	37.57	42.91
PGSC0003DMT400039213	Potato	plasma membrane	41.42	42.49
PGSC0003DMT400023418	Potato	plasma membrane	38.46	41.6
PGSC0003DMT400040459	Potato	plasma membrane	39.79	41.58
PGSC0003DMT400032061	Potato	plasma membrane	38.76	40.81
PGSC0003DMT400074103	Potato	plasma membrane	38.61	40.28
PGSC0003DMT400050673	Potato	plasma membrane	37.57	39.94
PGSC0003DMT400008826	Potato	plasma membrane	34.17	38.24
PGSC0003DMT400020520	Potato	plasma membrane	34.32	34.58
PGSC0003DMT400025493	Potato	plasma membrane	32.69	33.23
PGSC0003DMT400068804	Potato	plasma membrane	34.76	28.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009834
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M0ZS77	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400002689	PGSC:PGSC0003DMG400002689	EnsemblPlants:PGSC0003DMT400006944	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF33
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000294C82D	SEG:seg	:	:	:	:

Description

Receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400002689]

Coordinates

chr9:+:4088416..4091351

Molecular Weight (calculated)

74420.2 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.190

Length

676 amino acids

Sequence
(BLAST)

001: MNRFFSFILL LTLLISAVTA AVTATGDGND TAALLLFQSQ TDIHGTLLHN WTLPVNSTTA CTAQWLGVKC INNRVSAVIL PSFNLRGPIT ALSSLPLLRL
101: LDLRNNRLNG TLTPITQCTN LKLIYLSGND FSGEIPPEIS SLRRLLRLDV SNNNLEGSIP TQIANLTRLL TLRLQNNELS GTIPKSLNSL QNLKELNFSN
201: NELYGSVPNG LYNHFGENSF DGNEGLCGIG NLPQCSYTGE IVPSNPSSLP TTSTATIEEP HEKSRKGLSR GGVVAIVMVN VVALLVVVSF MVAYYCGKYS
301: RTQSFSMSGS ECGKRRSSYS SEKRVYANNN GGGGGDSDGT TATDRSKLVF FDRRKPFELE ELLRASAEML GKGCLGTVYK AVLDDGITVA VKRLKDANPC
401: PRKEFEQYMD VIGKLKHPNM VKLRAYYYAK EEKLLVYDYL PNGSLHSLLH GNRGPGRIPL DWTTRISLVL GAARGLAHIH EEYADSRIPH GNVKSSNVLL
501: DKNGVACISD FGLSLLLNPV HAIARLGGYK APEQSEIKRL SQKSDVYSFG VLLLEVLTGK APSEYPSPTR PHDEEEELPV DLPKWVRSVV RDEWTAEVFD
601: QELLRYKNIE EELVSMLHVA MACVVPLPEK RPTMVEVVKL IEEIRIEQSP LGEDYDESRN SLSPSLATTE DGLPGY

Best Arabidopsis Sequence Match ( AT2G36570.1 )
(BLAST)

001: MAAKPLLLPL LLLLHLSITL AQNDTNALTL FRLQTDTHGN LAGNWTGSDA CTSSWQGVSC SPSSHRVTEL SLPSLSLRGP LTSLSSLDQL RLLDLHDNRL
101: NGTVSPLTNC KNLRLVYLAG NDLSGEIPKE ISFLKRMIRL DLSDNNIRGV IPREILGFTR VLTIRIQNNE LTGRIPDFSQ MKSLLELNVS FNELHGNVSD
201: GVVKKFGDLS FSGNEGLCGS DPLPVCTITN DPESSNTDQI VPSNPTSIPH SPVSVREPEI HSHRGIKPGI IAAVIGGCVA VIVLVSFGFA FCCGRLDRNG
301: ERSKSGSVET GFVGGGEGKR RSSYGEGGES DATSATDRSR LVFFERRKQF ELDDLLKASA EMLGKGSLGT VYKAVLDDGS TTVAVKRLKD ANPCPRKEFE
401: QYMEIIGRLK HQNVVKLRAY YYAKEEKLLV YEYLPNGSLH SLLHGNRGPG RIPLDWTTRI SLMLGAARGL AKIHDEYSIS KIPHGNIKSS NVLLDRNGVA
501: LIADFGLSLL LNPVHAIARL GGYRAPEQSE IKRLSQKADV YSFGVLLLEV LTGKAPSIFP SPSRPRSAAS VAVEEEEEAV VDLPKWVRSV VKEEWTAEVF
601: DPELLRYKNI EEEMVAMLHI GLACVVPQPE KRPTMAEVVK MVEEIRVEQS PVGEDFDESR NSMSPSLATT DG

Arabidopsis Description

PXC1Leucine-rich repeat receptor-like protein kinase PXC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.