Factsheet for VIT_08s0007g04150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g008860.2.1	Tomato	plasma membrane	72.62	73.48
PGSC0003DMT400006944	Potato	plasma membrane	72.47	73.22
KRH67820	Soybean	plasma membrane	70.57	71.51
KRH20013	Soybean	plasma membrane	71.45	70.93
CDX84553	Canola	plasma membrane	66.76	69.41
Bra023075.1-P	Field mustard	plasma membrane	68.23	69.14
CDX79688	Canola	plasma membrane	64.86	68.79
AT2G36570.1	Thale cress	plasma membrane	67.06	68.15
KRG96115	Soybean	plasma membrane	71.01	67.08
KRH32636	Soybean	plasma membrane	70.28	65.31
HORVU5Hr1G063050.3	Barley	plasma membrane	36.02	52.56
TraesCS5B01G130800.1	Wheat	plasma membrane	54.9	50.34
TraesCS5D01G138400.1	Wheat	plasma membrane	54.76	50.2
TraesCS5A01G130900.1	Wheat	plasma membrane	54.61	50.07
Os12t0145900-01	Rice	golgi, plasma membrane	56.37	48.55
HORVU5Hr1G041210.4	Barley	plasma membrane	54.47	47.81
Zm00001d004929_P001	Maize	mitochondrion	53.29	47.46
VIT_01s0011g03860.t01	Wine grape	plasma membrane	46.56	47.39
OQU82868	Sorghum	plasma membrane	52.71	46.75
VIT_06s0004g08210.t01	Wine grape	plasma membrane	42.02	45.05
VIT_11s0016g04570.t01	Wine grape	plasma membrane	42.9	44.87
VIT_14s0006g01080.t01	Wine grape	plasma membrane	40.12	42.88
VIT_16s0050g02430.t01	Wine grape	plasma membrane	38.95	42.36
VIT_08s0040g00060.t01	Wine grape	plasma membrane	39.24	42.27
VIT_04s0008g01220.t01	Wine grape	plasma membrane	37.63	42.27
VIT_02s0025g01040.t01	Wine grape	plasma membrane	38.36	41.72
VIT_01s0011g05580.t01	Wine grape	plasma membrane	36.46	41.71
VIT_17s0000g02010.t01	Wine grape	plasma membrane	38.8	39.43
VIT_07s0031g00120.t01	Wine grape	plasma membrane	34.7	35.32
VIT_01s0010g01660.t01	Wine grape	plasma membrane	33.67	35.22
VIT_18s0001g10070.t01	Wine grape	plasma membrane	32.5	33.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266483	wikigene:100266483	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB55380	ProteinID:CCB55380.1	UniProt:F6HKF8	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009834	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266483
wikigene:LOC100266483	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF33	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TIGR:TC64349	TIGR:TC65086	TMHMM:TMhelix	UniParc:UPI00015C94A5
ArrayExpress:VIT_08s0007g04150	EnsemblPlantsGene:VIT_08s0007g04150	EnsemblPlants:VIT_08s0007g04150.t01	unigene:Vvi.13507	unigene:Vvi.16488	unigene:Vvi.16497
RefSeq:XP_002283857	RefSeq:XP_002283857.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:18144402..18146979

Molecular Weight (calculated)

74325.8 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.200

Length

683 amino acids

Sequence
(BLAST)

001: MEFYALPFSL SFLSLSFSLL LLLSPSLSLS NDTFALSQFR SQTDVHGTLI SNWTGADACS GVWRGVRCFD GRVAVLSLPS LSLRGPIDAL SGLNQLRILD
101: LQGNRLNGTV LPIANCTNLK LVYLAGNDFS GEIPPDFSSL RRLLRLDLSD NNLRGPIPGS LSSLPRLLTL RLENNVLSGQ VPDLSASLPN LKELNLSNNG
201: FYGHLPEGMA KKFGDRSFQG NEGLCGSSPL PACSFTEASP TAASAQTVPS NPSSLPSAPI IDAEKKRSRK GLSPGAIVAI VIANSVLLLV VASFVVAYYC
301: GRYSREGSSN SKAGSEGGRR RRSGSSSASE KKKVYASNGG GADSDGTNAT DRSKLVFFDR RKQFELEDLL RASAEMLGKG SLGTVYKAVL DDGCTVAVKR
401: LKDANPCARK EFEQYMDVIG KLKHPNIVRF RAYYYAKEEK LLVYDYLPNG SLHSLLHGNR GPGRIPLDWT TRISLVLGAA RGLARIHEEY TASKIPHGNV
501: KSSNILLDKN GVACISDFGL ALLLNPVHAT ARLGGYRAPE QLEIKRLSQK ADVYSFGVLL LEVLTGRAPS QYPSPSRPRV EEEEQGVDLP KWVRSVVKDE
601: WTAEVFDQEL LRYKNIEEEL VAMLQVGMAC VVPQPEKRPT MSEVAKMIED IRVEQSPLGE EYDESRNSLS PSLATTEDGL AGY

Best Arabidopsis Sequence Match ( AT2G36570.1 )
(BLAST)

001: MAAKPLLLPL LLLLHLSITL AQNDTNALTL FRLQTDTHGN LAGNWTGSDA CTSSWQGVSC SPSSHRVTEL SLPSLSLRGP LTSLSSLDQL RLLDLHDNRL
101: NGTVSPLTNC KNLRLVYLAG NDLSGEIPKE ISFLKRMIRL DLSDNNIRGV IPREILGFTR VLTIRIQNNE LTGRIPDFSQ MKSLLELNVS FNELHGNVSD
201: GVVKKFGDLS FSGNEGLCGS DPLPVCTITN DPESSNTDQI VPSNPTSIPH SPVSVREPEI HSHRGIKPGI IAAVIGGCVA VIVLVSFGFA FCCGRLDRNG
301: ERSKSGSVET GFVGGGEGKR RSSYGEGGES DATSATDRSR LVFFERRKQF ELDDLLKASA EMLGKGSLGT VYKAVLDDGS TTVAVKRLKD ANPCPRKEFE
401: QYMEIIGRLK HQNVVKLRAY YYAKEEKLLV YEYLPNGSLH SLLHGNRGPG RIPLDWTTRI SLMLGAARGL AKIHDEYSIS KIPHGNIKSS NVLLDRNGVA
501: LIADFGLSLL LNPVHAIARL GGYRAPEQSE IKRLSQKADV YSFGVLLLEV LTGKAPSIFP SPSRPRSAAS VAVEEEEEAV VDLPKWVRSV VKEEWTAEVF
601: DPELLRYKNI EEEMVAMLHI GLACVVPQPE KRPTMAEVVK MVEEIRVEQS PVGEDFDESR NSMSPSLATT DG

Arabidopsis Description

PXC1Leucine-rich repeat receptor-like protein kinase PXC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.