Factsheet for VIT_01s0011g05580.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008826	Potato	plasma membrane	53.6	52.98
Solyc01g067020.2.1	Tomato	plasma membrane	52.93	52.23
VIT_14s0006g01080.t01	Wine grape	plasma membrane	51.42	48.04
VIT_17s0000g02010.t01	Wine grape	plasma membrane	52.6	46.73
VIT_11s0016g04570.t01	Wine grape	plasma membrane	46.4	42.42
VIT_06s0004g08210.t01	Wine grape	plasma membrane	44.22	41.44
VIT_08s0040g00060.t01	Wine grape	plasma membrane	42.55	40.06
VIT_02s0025g01040.t01	Wine grape	plasma membrane	39.87	37.9
VIT_16s0050g02430.t01	Wine grape	plasma membrane	39.7	37.74
VIT_01s0011g03860.t01	Wine grape	plasma membrane	42.21	37.56
VIT_08s0007g04150.t01	Wine grape	plasma membrane	41.71	36.46
VIT_04s0008g01220.t01	Wine grape	plasma membrane	36.68	36.02
VIT_01s0010g01660.t01	Wine grape	plasma membrane	35.85	32.77
VIT_07s0031g00120.t01	Wine grape	plasma membrane	33.84	30.1
VIT_18s0001g10070.t01	Wine grape	plasma membrane	33.0	29.76

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247349	wikigene:100247349	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB50794	ProteinID:CCB50794.1	UniProt:F6HFE5	EMBL:FN595752	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100247349	wikigene:LOC100247349	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF19	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	TIGR:TC64468	TMHMM:TMhelix	UniParc:UPI00021081D5	ArrayExpress:VIT_01s0011g05580	EnsemblPlantsGene:VIT_01s0011g05580
EnsemblPlants:VIT_01s0011g05580.t01	unigene:Vvi.15586	RefSeq:XP_002281181	RefSeq:XP_002281181.1	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:5301668..5310063

Molecular Weight (calculated)

65121.0 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.094

Length

597 amino acids

Sequence
(BLAST)

001: MGVARNDCDG DLYLMVAALL AFRDSVRGST LIWNGTDTCS WEGIQCDADR VTSLRLPADD LTGNIPPNTL GNLTQLRDLS LRGNSLTGNL PSDLGSCTQL
101: QRLFLQDNQF SGQIPAGLFL LNNLVRLDLS RNNLSGEISQ GFGNLTKLRT LYLERNQLSG SIPDLNLELR DFNVSYNRLS GSIPKGLRNF GSDAFQGNSL
201: CGSPLASCPD SGNKLSGGAI AGIVIASVIG LVLIIIVVLI FFRKYRRTTR SGPEFEIPSN QPVDMGENGG GINGFPAEKA ANGVEKIRNA NGLVFLGNGL
301: SVFDLEELLR ASAEVLGKGT CGTTYKAMVG EGVEVVVKRL RNICVYEREF LEEVARLGGM VHENLASIRA YYYGRDEKLL IYDCLPMGNL SSLLHGDRGA
401: WRAPLSWEVR GRIALGAARG IKYLHSHGPN VSHGNIKSSN ILLTNSCDAL VTEFGIVQLV SVTSAPKHSG YCAPETRGSY TVSQKADVYS FGVVLLELLT
501: AKAPTYALSN EEEMELPRWV ESVVEERGTI DVFDLELLRY DNIEEQVVQL LHLALLCTSK HPKRRPSMAE VTRQIELIFG SGLPEYEPQP NQIEDGS

Best Arabidopsis Sequence Match ( AT3G17840.1 )
(BLAST)

001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG

Arabidopsis Description

RLK902Probable inactive receptor kinase RLK902 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.