Factsheet for Zm00001d004929_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
plasma membrane 2
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82868	Sorghum	plasma membrane	88.14	87.79
TraesCS5D01G138400.1	Wheat	plasma membrane	76.01	78.25
TraesCS5B01G130800.1	Wheat	plasma membrane	75.88	78.12
TraesCS5A01G130900.1	Wheat	plasma membrane	75.62	77.85
HORVU5Hr1G063050.3	Barley	plasma membrane	47.07	77.14
Os12t0145900-01	Rice	golgi, plasma membrane	76.92	74.4
HORVU5Hr1G041210.4	Barley	plasma membrane	75.23	74.16
CDX84553	Canola	plasma membrane	46.02	53.73
KRH67820	Soybean	plasma membrane	46.94	53.41
VIT_08s0007g04150.t01	Wine grape	plasma membrane	47.46	53.29
CDX79688	Canola	plasma membrane	44.46	52.95
Bra023075.1-P	Field mustard	plasma membrane	46.41	52.82
KRH20013	Soybean	plasma membrane	47.2	52.62
Solyc09g008860.2.1	Tomato	plasma membrane	45.76	52.0
AT2G36570.1	Thale cress	plasma membrane	45.5	51.93
PGSC0003DMT400006944	Potato	plasma membrane	45.11	51.18
KRH32636	Soybean	plasma membrane	47.72	49.8
KRG96115	Soybean	plasma membrane	46.41	49.24
Zm00001d039967_P001	Maize	plasma membrane	36.64	42.38
Zm00001d008965_P001	Maize	plasma membrane	35.59	40.62
Zm00001d038487_P003	Maize	plasma membrane	33.38	40.38
Zm00001d039188_P001	Maize	plasma membrane	34.03	39.91
Zm00001d012514_P001	Maize	extracellular	32.72	39.9
Zm00001d022432_P001	Maize	plasma membrane	32.72	39.47
Zm00001d039325_P001	Maize	plasma membrane	33.51	39.12
Zm00001d048054_P002	Maize	mitochondrion, plasma membrane	33.77	38.54
Zm00001d043071_P001	Maize	plasma membrane	33.64	38.51
Zm00001d048053_P001	Maize	plasma membrane	33.51	38.42
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	34.16	38.19
Zm00001d020403_P001	Maize	plasma membrane	31.55	37.75
Zm00001d044434_P001	Maize	plasma membrane	33.9	37.3
Zm00001d033745_P001	Maize	plasma membrane	33.64	37.18
Zm00001d003399_P001	Maize	mitochondrion, plasma membrane	32.2	36.48
Zm00001d013430_P001	Maize	mitochondrion	33.9	35.91
Zm00001d011707_P001	Maize	plasma membrane	29.47	34.72
Zm00001d029040_P001	Maize	mitochondrion	32.07	34.17
Zm00001d032244_P001	Maize	plasma membrane	29.2	33.38
Zm00001d050355_P001	Maize	plasma membrane	30.12	33.24
Zm00001d002068_P001	Maize	plasma membrane	27.9	30.53
Zm00001d018541_P002	Maize	plasma membrane	30.51	29.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103647090	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	UniProt:A0A1D6EI76
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009834	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ProteinID:ONM19815.1	PFAM:PF00069
PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF33	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	UniParc:UPI0002218C20	EnsemblPlantsGene:Zm00001d004929	EnsemblPlants:Zm00001d004929_P001	EnsemblPlants:Zm00001d004929_T001
SEG:seg	:	:	:	:	:

Description

Leucine-rich repeat receptor-like protein kinase PXC1

Coordinates

chr2:+:149268089..149270752

Molecular Weight (calculated)

81030.8 Da

IEP (calculated)

7.770

GRAVY (calculated)

-0.138

Length

767 amino acids

Sequence
(BLAST)

001: MPISLHLHSP RRRRRPHLRL PAAAMRVRLS FLLLSAAFLT ILSAAAPSAV PDPEPEVKPS DTDALTIFRH GADAHGILAA NWSTGDACAG RWAGVGCSAD
101: GRRVTSLTLP SLDLRGPLDP LSHLAELRAL DLRGNRLNGT LDALLRGAPG LVLLYLSRND VSGAVPTAAL ARLTRLVRLD LADNSLTGPV PPAPALAGLT
201: ALVTLRLQDN LLTGLVPDVA AALPRLADFN TSNNQLSGRL PDAMRARFGL ASFAGNAGLC GPAPPLPHCE FLPREPAPTP PSSSTSSSSV LPSNPAASSS
301: VASSSPALAT QESLSRRPGL SPGAVAGIAV GNALFFALAS LLVACCCCGR GGGGEPAAAK KRKRRGGRVG LEDGGGGGAL FGHLKGEQQP ARPGSAGQCS
401: DGGDSDGARS KLVFFGADGG EEDHGDGDGD GAPLTSHLQG RRGTRFQLEE LLRASAEMVG RGSLGTVYRA VLSDGRMVAV KRLRDANPCA RDEFHRYMDL
501: IGRLRHPHLV PLRAFYYARQ EKLLIYDYLP NGNLHDRLHG HKMSGESALD WTTRVRLLLG AARGLACIHR EYRTSGVPHG NVKSTNVLLD KDGAARVADF
601: GLALLLSPAH AIARLGGYTA PEQQDDKRLS QEADVYSFGV LVLEALTGKA PAQHPQPDAR KKGAAATSLS LPEWVRSVVR EEWTAEVFDV ELLRYRDIEE
701: EMVALLHVAL ACVAPLPEQR PSMGDVVRMI ESVPVEQSPA PEEDVDVSVT SPSIGITTDD GDGRLSY

Best Arabidopsis Sequence Match ( AT2G36570.1 )
(BLAST)

001: MAAKPLLLPL LLLLHLSITL AQNDTNALTL FRLQTDTHGN LAGNWTGSDA CTSSWQGVSC SPSSHRVTEL SLPSLSLRGP LTSLSSLDQL RLLDLHDNRL
101: NGTVSPLTNC KNLRLVYLAG NDLSGEIPKE ISFLKRMIRL DLSDNNIRGV IPREILGFTR VLTIRIQNNE LTGRIPDFSQ MKSLLELNVS FNELHGNVSD
201: GVVKKFGDLS FSGNEGLCGS DPLPVCTITN DPESSNTDQI VPSNPTSIPH SPVSVREPEI HSHRGIKPGI IAAVIGGCVA VIVLVSFGFA FCCGRLDRNG
301: ERSKSGSVET GFVGGGEGKR RSSYGEGGES DATSATDRSR LVFFERRKQF ELDDLLKASA EMLGKGSLGT VYKAVLDDGS TTVAVKRLKD ANPCPRKEFE
401: QYMEIIGRLK HQNVVKLRAY YYAKEEKLLV YEYLPNGSLH SLLHGNRGPG RIPLDWTTRI SLMLGAARGL AKIHDEYSIS KIPHGNIKSS NVLLDRNGVA
501: LIADFGLSLL LNPVHAIARL GGYRAPEQSE IKRLSQKADV YSFGVLLLEV LTGKAPSIFP SPSRPRSAAS VAVEEEEEAV VDLPKWVRSV VKEEWTAEVF
601: DPELLRYKNI EEEMVAMLHI GLACVVPQPE KRPTMAEVVK MVEEIRVEQS PVGEDFDESR NSMSPSLATT DG

Arabidopsis Description

PXC1Leucine-rich repeat receptor-like protein kinase PXC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.