Factsheet for PGSC0003DMT400039213

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g111670.2.1	Tomato	extracellular	96.97	96.97
VIT_11s0016g04570.t01	Wine grape	plasma membrane	73.75	74.43
KRH56662	Soybean	plasma membrane	70.71	72.93
KRH03778	Soybean	endoplasmic reticulum	71.78	72.77
CDX77054	Canola	plasma membrane	66.92	71.47
AT2G26730.1	Thale cress	plasma membrane	70.41	70.52
CDY48185	Canola	plasma membrane	69.2	69.41
Bra034311.1-P	Field mustard	plasma membrane	69.04	69.25
Bra012045.1-P	Field mustard	plasma membrane	66.16	69.1
CDY04464	Canola	plasma membrane	66.16	68.99
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	51.29	63.65
GSMUA_Achr4P08980_001	Banana	plasma membrane	46.89	62.42
CDX71488	Canola	plasma membrane	66.31	59.78
GSMUA_Achr5P09830_001	Banana	plasma membrane	53.41	59.56
PGSC0003DMT400036789	Potato	cytosol	28.38	58.26
Os05t0588300-01	Rice	cytosol, mitochondrion	17.45	56.65
TraesCS3A01G217800.1	Wheat	plasma membrane, vacuole	43.55	54.88
PGSC0003DMT400013468	Potato	plasma membrane	51.29	53.23
TraesCS5B01G025300.1	Wheat	plasma membrane	53.87	52.91
TraesCS5A01G026300.1	Wheat	plasma membrane	53.87	52.91
HORVU3Hr1G053300.1	Barley	plasma membrane	53.26	52.39
TraesCS5D01G034200.1	Wheat	plasma membrane	53.57	52.3
TraesCS3B01G248200.1	Wheat	golgi	53.57	52.22
Os01t0607900-01	Rice	plasma membrane	54.17	52.19
HORVU5Hr1G007340.7	Barley	plasma membrane	53.26	52.15
EES03251	Sorghum	plasma membrane	54.48	52.03
TraesCS3D01G234500.1	Wheat	plasma membrane	53.26	51.92
PGSC0003DMT400046218	Potato	plasma membrane	51.29	51.84
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	53.87	51.75
Zm00001d044434_P001	Maize	plasma membrane	54.02	51.08
PGSC0003DMT400078299	Potato	plasma membrane	48.56	50.87
PGSC0003DMT400040459	Potato	plasma membrane	48.41	49.3
PGSC0003DMT400070937	Potato	plasma membrane	43.7	48.65
PGSC0003DMT400023418	Potato	plasma membrane	45.98	48.48
PGSC0003DMT400032061	Potato	plasma membrane	46.74	47.98
PGSC0003DMT400074103	Potato	plasma membrane	46.74	47.53
EES18787	Sorghum	plasma membrane	48.71	46.52
Zm00001d039188_P001	Maize	plasma membrane	46.13	46.48
HORVU3Hr1G089490.3	Barley	plasma membrane	47.65	45.24
TraesCS3D01G391600.1	Wheat	plasma membrane	46.59	43.98
PGSC0003DMT400037779	Potato	plasma membrane	44.92	43.98
TraesCS3B01G429600.1	Wheat	plasma membrane	46.43	43.78
TraesCS3A01G397700.1	Wheat	plasma membrane	46.43	43.78
PGSC0003DMT400008826	Potato	plasma membrane	40.06	43.71
PGSC0003DMT400006944	Potato	plasma membrane	42.49	41.42
PGSC0003DMT400050673	Potato	plasma membrane	37.03	38.36
PGSC0003DMT400020520	Potato	plasma membrane	34.45	33.83
PGSC0003DMT400025493	Potato	plasma membrane	32.63	32.33
PGSC0003DMT400068804	Potato	plasma membrane	37.03	30.05

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102602951	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1B7X8	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400015162	PGSC:PGSC0003DMG400015162	EnsemblPlants:PGSC0003DMT400039213	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF24
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296CD02
RefSeq:XP_006351444.1	SEG:seg	:	:	:	:

Description

Nodulation receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400015162]

Coordinates

chr3:-:51301507..51305421

Molecular Weight (calculated)

71709.1 Da

IEP (calculated)

8.013

GRAVY (calculated)

-0.119

Length

659 amino acids

Sequence
(BLAST)

001: MAVFLRFVFC VLFFALLGLS RFRVFSEPTQ DKQALLAFFS QIRHANRVQW NSSASVCTWF GVECDPNNSF VYSLRLPAVG LVGKIPSNSL GRLSQLRVLS
101: LHANRLSGSI PSDFSNLKLL RSLYLQKNDF SGEFPESIPG LTRLNRLDLS SNNFTGTIPF SINNLTHLTG LLLQNNSFTG TLPSINPPGL VDFSVSNNQL
201: NGSIPTALSK FPASSFTGNI DLCGGPLPPC TPFFPSPSPS PETEPKTPPS IKKSKKLSTA AIVGIIIGSI IGVLLLLLLL FFCLKRRKND TSKVQKPPVA
301: SRAIGAVTGA AAEAGTSSSK DDLTGGSGEG ERNKLVFFDG GGYSFDLEDL LRASAEVLGK GSVGTSYKAV LEEGTTVVVK RLKDVVVPRK EFEQQLEVMG
401: KMKHENVLPL RAFYYSKDEK LLVSDYMPAG SLSALLHGSR GSGRTPLDWD SRMRIVLGAA RGIAYLHISG KVVHGNIKAS NVLLKQDNQD ACVSDYGLNP
501: LFSTSAPVNH RVAGYRAPEV LETRKVTYKS DVYSFGVLML ELLTGKAPNQ ASLGEEGIDL PRWVQSVVRE EWTAEVFDVE LMRYHNVEEE MVQLLQIGMA
601: CVATMPDQRP AMTEVVKMIE EMNHGDTDDG LRQSSDDPSK GSEGQTPQES RGSPHGVTP

Best Arabidopsis Sequence Match ( AT2G26730.1 )
(BLAST)

001: MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS
101: NRLSGQIPSD FSNLTHLRSL YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP SISLGLVDFN VSNNNLNGSI
201: PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV
301: ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK
401: IKHPNVIPLR AYYYSKDEKL LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN ILLHPNQDTC VSDYGLNQLF
501: SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS
601: TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP

Arabidopsis Description

Probable inactive receptor kinase At2g26730 [Source:UniProtKB/Swiss-Prot;Acc:O48788]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.