Factsheet for TraesCS3B01G248200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G217800.1	Wheat	plasma membrane, vacuole	75.59	97.71
TraesCS3D01G234500.1	Wheat	plasma membrane	97.63	97.63
HORVU3Hr1G053300.1	Barley	plasma membrane	94.38	95.22
TraesCS5B01G025300.1	Wheat	plasma membrane	80.92	81.52
Os01t0607900-01	Rice	plasma membrane	81.95	80.99
EES03251	Sorghum	plasma membrane	80.77	79.13
Zm00001d011312_P001	Maize	mitochondrion, plasma membrane	77.51	76.38
Zm00001d044434_P001	Maize	plasma membrane	78.4	76.04
GSMUA_Achr4P08980_001	Banana	plasma membrane	46.15	63.03
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	47.34	60.26
KRH63039	Soybean	cytosol	22.93	58.71
VIT_11s0016g04570.t01	Wine grape	plasma membrane	56.07	58.04
GSMUA_Achr5P09830_001	Banana	plasma membrane	50.15	57.36
KRH03778	Soybean	endoplasmic reticulum	54.73	56.92
KRH56662	Soybean	plasma membrane	53.7	56.81
CDX77054	Canola	plasma membrane	51.63	56.56
Bra012045.1-P	Field mustard	plasma membrane	52.51	56.26
CDY04464	Canola	plasma membrane	52.51	56.17
Bra034311.1-P	Field mustard	plasma membrane	54.44	56.01
KRH54823	Soybean	nucleus	53.99	55.9
TraesCS3B01G429600.1	Wheat	plasma membrane	57.69	55.79
CDY48185	Canola	plasma membrane	54.14	55.71
AT2G26730.1	Thale cress	plasma membrane	53.11	54.56
Solyc03g111670.2.1	Tomato	extracellular	52.51	53.87
PGSC0003DMT400039213	Potato	plasma membrane	52.22	53.57
CDX71488	Canola	plasma membrane	52.37	48.43
TraesCS4B01G047100.1	Wheat	plasma membrane	45.71	45.78
TraesCS3B01G374400.1	Wheat	plasma membrane	42.31	45.18
TraesCS1B01G311800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.31	44.69
TraesCS2B01G121100.1	Wheat	plasma membrane	42.16	44.67
TraesCS4B01G171300.1	Wheat	plasma membrane	41.86	44.43
TraesCS1B01G311700.1	Wheat	plasma membrane, plastid	30.92	44.09
TraesCS3B01G175300.1	Wheat	plasma membrane	41.42	44.03
TraesCS4B01G241500.1	Wheat	plasma membrane	40.68	43.65
TraesCS2B01G344900.1	Wheat	plasma membrane	41.86	42.43
TraesCS3B01G046700.1	Wheat	plasma membrane	40.38	40.62
TraesCS5B01G202900.1	Wheat	plasma membrane	39.2	40.58
TraesCS7B01G121600.1	Wheat	plasma membrane	36.54	38.53
TraesCS5B01G130800.1	Wheat	plasma membrane	39.79	36.11
TraesCS3B01G279800.1	Wheat	plasma membrane	33.28	34.94
TraesCS6B01G472100.1	Wheat	plasma membrane	34.62	33.43
TraesCS2B01G540400.2	Wheat	plasma membrane	32.4	31.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PFscan:PS51257	PANTHER:PTHR27008	PANTHER:PTHR27008:SF24	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G248200	EnsemblPlants:TraesCS3B01G248200.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:395379919..395385346

Molecular Weight (calculated)

70519.7 Da

IEP (calculated)

8.553

GRAVY (calculated)

0.044

Length

676 amino acids

Sequence
(BLAST)

001: MPVAVSRAVL LAAVASLACL AFAEPPPSER SALLAFLTAT PHERRLGWNT STPACAWVGV TCDAAQSTVV QLRLPGVGLV GAIPPATIGR LPNLQVLSLR
101: SNRIIGGIPD DLLHLSSLRA IFLQNNMISG AIPAGVGKLA ALQRLVLSHN NLSGPIPFAL NSLASLRSLR LEGNRLEGKI PSIANPELKD FNVSVNSLNG
201: SIPQALARFP ADSFAGNLQL CGKPLPPCSP FFPSPSPAPG MSPSDEPGAV SNKKRKLSGA AIAGIVVGAV VVALLLLAAI VLCARSRRRR GAREGAPKGT
301: SAAATGQTRG VAPPASGDIT GMTSSSKDDM GGGTSGSAAA AAVAAGAGTG EASRLVFLGK GAGYSFDLED LLRASAEVLG KGSVGTSYKA VLEEGTTVVV
401: KRLKDVAVAR REFDAHMEAL GRVEHRNLLP VRAYYFSKDE KLLVYDYLPN GSLSAMLHGS RGSGRTPMDW DARMRSALSA SRGLAYLHSA HNLAHGNVKS
501: SNVLLRPDYD AAALSDFCLH PIFAPSSIRA GAGGYRAPEV VDTRRPTFKA DVYSLGVLLL ELLTGKSPTH ASLEGDGTLD LPRWVQSVVR EEWTAEVFDV
601: ELVRLGASAE EEMVALLQVA MACVATVPDA RPDAPDVVRM IEEIGGGHGQ TTTEESARGT PEEERSRGTP PAAPTP

Best Arabidopsis Sequence Match ( AT2G26730.1 )
(BLAST)

001: MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS
101: NRLSGQIPSD FSNLTHLRSL YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP SISLGLVDFN VSNNNLNGSI
201: PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV
301: ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK
401: IKHPNVIPLR AYYYSKDEKL LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN ILLHPNQDTC VSDYGLNQLF
501: SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS
601: TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP

Arabidopsis Description

Probable inactive receptor kinase At2g26730 [Source:UniProtKB/Swiss-Prot;Acc:O48788]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.