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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0332900-01 Rice plasma membrane 80.35 80.6
TraesCS4D01G173400.1 Wheat plasma membrane 78.93 78.81
TraesCS4B01G171300.1 Wheat plasma membrane 78.77 78.65
TraesCS4A01G133400.1 Wheat plasma membrane 78.77 78.65
Zm00001d029040_P001 Maize mitochondrion 88.21 77.92
HORVU4Hr1G050770.1 Barley plasma membrane 77.99 77.86
KXG36955 Sorghum plasma membrane 69.81 69.48
GSMUA_Achr3P09720_001 Banana plasma membrane 56.76 60.47
VIT_06s0004g08210.t01 Wine grape plasma membrane 59.59 59.5
VIT_08s0040g00060.t01 Wine grape plasma membrane 57.55 57.73
EES01662 Sorghum plasma membrane 57.39 57.48
KRH72840 Soybean nucleus 58.96 57.34
KRH17210 Soybean nucleus 58.8 57.1
PGSC0003DMT400078299 Potato plasma membrane 56.29 56.92
KRH00489 Soybean plasma membrane 53.93 56.51
Solyc06g082610.2.1 Tomato plasma membrane 55.5 56.48
KRH40666 Soybean plasma membrane 53.77 56.34
EES19702 Sorghum plasma membrane 55.97 56.24
Bra020377.1-P Field mustard plastid 36.79 55.58
CDY02808 Canola plastid 36.79 55.58
KRG98109 Soybean mitochondrion 57.55 54.79
PGSC0003DMT400013468 Potato plasma membrane 54.56 54.65
CDX88667 Canola plasma membrane 53.46 54.4
KRH30670 Soybean plasma membrane 57.39 54.4
Bra006774.1-P Field mustard plasma membrane 55.35 54.15
Solyc03g095490.2.1 Tomato plastid 53.77 53.86
KRH53701 Soybean plasma membrane 54.25 53.74
Solyc09g030450.2.1 Tomato plasma membrane 53.3 53.55
CDY58565 Canola plasma membrane 54.87 53.45
CDY32713 Canola plasma membrane 54.56 53.3
PGSC0003DMT400046218 Potato plasma membrane 54.56 53.22
AT5G58300.1 Thale cress plasma membrane 54.56 53.06
KRH64226 Soybean plasma membrane 52.83 52.5
PGSC0003DMT400070937 Potato plasma membrane 47.96 51.52
CDY27986 Canola plasma membrane 51.1 51.51
Bra009091.1-P Field mustard plasma membrane 50.47 51.44
CDX70172 Canola plasma membrane 50.47 51.44
CDY35996 Canola plasma membrane 51.26 51.34
AT3G08680.2 Thale cress plasma membrane 51.57 51.25
CDX98821 Canola plasma membrane 50.47 51.11
Solyc06g048560.1.1 Tomato plasma membrane 47.17 50.59
Bra040054.1-P Field mustard plasma membrane, plastid 50.31 50.16
AT5G05160.1 Thale cress plasma membrane 49.84 49.53
KRH72555 Soybean plasma membrane 50.16 49.23
KRH16952 Soybean plasma membrane 50.16 49.08
KXG31530 Sorghum plasma membrane 46.23 44.08
EER95247 Sorghum plasma membrane 45.13 42.58
EES03251 Sorghum plasma membrane 45.91 42.32
EER90996 Sorghum plasma membrane 43.4 39.66
KXG26481 Sorghum plasma membrane 40.57 38.39
EES18787 Sorghum plasma membrane 41.2 37.97
EES02541 Sorghum plasma membrane 41.04 36.76
KXG35590 Sorghum plasma membrane 37.58 36.6
EES15012 Sorghum plasma membrane 36.48 35.42
OQU82868 Sorghum plasma membrane 39.15 32.34
KXG33230 Sorghum plasma membrane 32.86 31.67
EES07820 Sorghum plasma membrane 34.43 31.2
KXG27266 Sorghum plasma membrane 33.02 29.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6QND6GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675ProteinID:KXG39436.1ProteinID:KXG39437.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptProteinID:OQU92654.1EnsemblPlants:OQU92655ProteinID:OQU92655ProteinID:OQU92655.1
PFAM:PF00069PFAM:PF00560PFAM:PF08263PRINTS:PR00019ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF2InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSEnsemblPlantsGene:SORBI_3001G382700SUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001C80A93SEG:seg:
Description
hypothetical protein
Coordinates
chr1:-:67044225..67049363
Molecular Weight (calculated)
69658.3 Da
IEP (calculated)
8.154
GRAVY (calculated)
-0.090
Length
636 amino acids
Sequence
(BLAST)
001: MGDLNHGSSL PLLLCLHLLL PLLPFAMADI ASEKQALLAF ASAVYRGNKL NWSQNIPLCS WHGVICSPDR SRILALRVPG AGLIGTIPAN TLGRLVFLQV
101: LSLRSNRLSG SLPYDVASLP SLQAIFLQHN ELSGDLPPFL SPNLNTLDLS YNSFTGEIPP GLQNLTKLSI LNLAGNSLSG PIPDLKLPSL RQLNLSNNEL
201: NGSIPPFLQI FSNSSFLGNS GLCGPPLPEC SFLSSPTPSQ VPSPSKLPHH EKKAGNGLVI AAVAGSFVIL LLAAVMFTMC ISKRKEKKDE VGYNGKVTDG
301: LRIEKRKEDV SSGVQMAHKN KLVFLEGCSY NFDLEDLLRA SAEVLGKGSY GTAYKAILED STSVVVKRLK DVVAGKKEFE QQMELIGRVG KHANIAPIRA
401: YYYSKDEKLV VYEYIATGSF SALLHGIKGV CEKTPLDWNT RMKIILGTAR GIEHIHSEGG SKFAHGNIKS TNVLLDQERN PYVSDYGLSS LMSLPINTSR
501: VGTGYRAQET FESRKFTHKS DVYSFGVLLM EMLTGKAPLQ SQGQDDVAID LPRWVHSVVR EEWTAEVFDV QLMKYPNIED ELVQMLHIAM ACTAWSPDRR
601: PTMAEVIRMM EELRRPASES RTPSIGNPKE SSPLSA
Best Arabidopsis Sequence Match ( AT3G08680.1 )
(BLAST)
001: MMKIIAAFLF LLVTTFVSRC LSADIESDKQ ALLEFASLVP HSRKLNWNST IPICASWTGI TCSKNNARVT ALRLPGSGLY GPLPEKTFEK LDALRIISLR
101: SNHLQGNIPS VILSLPFIRS LYFHENNFSG TIPPVLSHRL VNLDLSANSL SGNIPTSLQN LTQLTDLSLQ NNSLSGPIPN LPPRLKYLNL SFNNLNGSVP
201: SSVKSFPASS FQGNSLLCGA PLTPCPENTT APSPSPTTPT EGPGTTNIGR GTAKKVLSTG AIVGIAVGGS VLLFIILAII TLCCAKKRDG GQDSTAVPKA
301: KPGRSDNKAE EFGSGVQEAE KNKLVFFEGS SYNFDLEDLL RASAEVLGKG SYGTTYKAIL EEGTTVVVKR LKEVAAGKRE FEQQMEAVGR ISPHVNVAPL
401: RAYYFSKDEK LLVYDYYQGG NFSMLLHGNN EGGRAALDWE TRLRICLEAA RGISHIHSAS GAKLLHGNIK SPNVLLTQEL HVCVSDFGIA PLMSHHTLIP
501: SRSLGYRAPE AIETRKHTQK SDVYSFGVLL LEMLTGKAAG KTTGHEEVVD LPKWVQSVVR EEWTGEVFDV ELIKQQHNVE EEMVQMLQIA MACVSKHPDS
601: RPSMEEVVNM MEEIRPSGSG PGSGNRASSP EMIRSSDSPV
Arabidopsis Description
Probable inactive receptor kinase At3g08680 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.