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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002068_P001 Maize plasma membrane 93.72 93.72
Os04t0649700-01 Rice plasma membrane 81.31 80.28
TraesCS2D01G513900.1 Wheat plasma membrane 75.89 76.0
TraesCS2B01G540400.2 Wheat plasma membrane 75.89 76.0
TraesCS2A01G512500.1 Wheat plasma membrane 76.46 75.92
HORVU2Hr1G113540.1 Barley plastid 64.19 74.01
GSMUA_Achr4P09880_001 Banana plasma membrane 53.21 61.76
GSMUA_Achr7P20790_001 Banana plasma membrane 48.5 57.92
GSMUA_Achr10P... Banana golgi, plasma membrane 50.93 55.52
CDY22372 Canola cytosol 23.25 55.25
CDX71536 Canola cytosol 23.11 54.92
Bra033656.1-P Field mustard cytosol 23.11 54.92
GSMUA_Achr9P25250_001 Banana plastid 49.22 53.41
KRH04550 Soybean plasma membrane 45.93 49.39
VIT_18s0001g10070.t01 Wine grape plasma membrane 46.36 49.09
KRH57812 Soybean golgi, plasma membrane, plastid 44.94 48.91
VIT_07s0031g00120.t01 Wine grape plasma membrane 46.08 48.14
CDX81336 Canola plasma membrane 41.8 47.03
Solyc04g078590.2.1 Tomato plasma membrane 43.79 45.96
PGSC0003DMT400020520 Potato plasma membrane 43.65 45.6
Solyc02g093100.2.1 Tomato plasma membrane 43.08 45.35
PGSC0003DMT400025493 Potato plasma membrane 42.94 45.26
AT5G67200.1 Thale cress plasma membrane 42.51 44.54
KRH61335 Soybean plasma membrane 46.08 44.37
Bra012141.1-P Field mustard plasma membrane 42.8 43.86
CDY01430 Canola plasma membrane 42.8 43.86
AT5G43020.1 Thale cress plasma membrane 40.8 42.75
KRH52034 Soybean cytosol, plasma membrane, plastid 31.67 42.61
CDX83117 Canola plasma membrane 39.8 42.6
CDX68581 Canola plasma membrane 39.52 42.42
AT3G50230.2 Thale cress plasma membrane 39.23 40.92
Bra029997.1-P Field mustard plastid 28.1 40.29
EES07820 Sorghum plasma membrane 38.09 38.03
CDX71537 Canola extracellular 14.69 36.14
KXG36955 Sorghum plasma membrane 30.96 33.96
EES03251 Sorghum plasma membrane 32.81 33.33
EES19702 Sorghum plasma membrane 30.1 33.33
EES02541 Sorghum plasma membrane 33.67 33.24
OQU92655 Sorghum plasma membrane 29.96 33.02
KXG31530 Sorghum plasma membrane 31.38 32.98
EES01662 Sorghum plasma membrane 29.67 32.76
KXG35590 Sorghum plasma membrane 30.1 32.31
EES18787 Sorghum plasma membrane 31.53 32.03
KXG26481 Sorghum plasma membrane 29.24 30.51
EER90996 Sorghum plasma membrane 30.24 30.46
EER95247 Sorghum plasma membrane 28.96 30.12
KXG33230 Sorghum plasma membrane 27.53 29.24
EES15012 Sorghum plasma membrane 27.25 29.16
OQU82868 Sorghum plasma membrane 30.24 27.53
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6PNM5GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG27266ProteinID:KXG27266ProteinID:KXG27266.1InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFscan:PS50011PANTHER:PTHR27008
PANTHER:PTHR27008:SF39InterPro:Prot_kinase_domEnsemblPlantsGene:SORBI_3006G241800SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00081AB42ESEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:58242697..58247823
Molecular Weight (calculated)
74178.9 Da
IEP (calculated)
8.759
GRAVY (calculated)
-0.040
Length
701 amino acids
Sequence
(BLAST)
001: MAHRHRAPLL PILLLILLLA TSAFAANGAA SHSQPTLPTP PVQAAAVPPS AALASKPPPV SPSAAALAAF LAKADPASRL GVPNPAASPC SRPGITCTAS
101: GQIIRLVLES SGLNGTFPQG TLSRLAELRV LSLKSNALHG PVPDLSPLAN LKALFLAGNR FSGPFPPSLA SLRRLRSIDL SGNRLSGALP PGIEAAFPHL
201: TFLRLDANHF SGTLPPWNQS SLKVLNVSYN NFSGPVPVTP VITQLGAAAF AGNPELCGEV VRRECRGSHL LFFHGGDGAN GTAAAPVQSA AASDSGPQRE
301: NLSMPDSSAP NAKRVRRRRT TVAVAVAAGS ILAALLVCAM IAMKRSNKRG RPSSASYASP IPKKSAPASE VSRDNADMGY VECVPDEETA AIMVPEEKAR
401: RLERSGCLTF CAGEAASYSL EQLMRASAEV LGRGSVGTTY KAVLDGRLVV IVKRLDAAKI GPAALEAEAF EQNMDAVGRL RHPNLVPLRA FFQAKEERLL
501: VYDYQPNGSL YSLIHGSRSS RAKPLHWTSC LKIAEDVAQG LAYIHQASRL VHGNIKSSNV LLGSDFEACL TDNCLSFLLE SSEVKDDAAY RAPENMKSNR
601: MLTPKSDIYA FGVLLLELLS GKPPLQHSVL VASNLQTYVQ SAREDEGVDS DRITMIVDIA ATCVRSSPES RPAAWQVLKM IQEVKEADAT GDNDSDLTSN
701: S
Best Arabidopsis Sequence Match ( AT5G67200.1 )
(BLAST)
001: MTLNFFLPFF FFFILLRVSA GAEPNYFNSL LPSDAVALLS FKSTADLDNK LLYSLTERYD YCQWRGVKCA QGRIVRLVLS GVGLRGYFSS ATLSRLDQLR
101: VLSLENNSLF GPIPDLSHLV NLKSLFLSRN QFSGAFPPSI LSLHRLMILS ISHNNFSGSI PSEINALDRL TSLNLDFNRF NGTLPSLNQS FLTSFNVSGN
201: NLTGVIPVTP TLSRFDASSF RSNPGLCGEI INRACASRSP FFGSTNKTTS SEAPLGQSAQ AQNGGAVVIP PVVTKKKGKE SGLVLGFTAG LASLIVLGLC
301: LVVFSLVIKK RNDDGIYEPN PKGEASLSQQ QQSQNQTPRT RAVPVLNSDT ESQKREKEVQ FQETEQRIPN SGNLVFCGES RSQGMYTMEQ LMRASAELLG
401: RGSVGITYKA VLDNQLIVTV KRLDAAKTAV TSEEAFENHM EIVGGLRHTN LVPIRSYFQS NGERLIIYDY HPNGSLFNLI HGSRSSRAKP LHWTSCLKIA
501: EDVAQGLYYI HQTSSALVHG NLKSTNILLG QDFEACLTDY CLSVLTDSSS ASPDDPDSSS YKAPEIRKSS RRPTSKCDVY SFGVLIFELL TGKNASRHPF
601: MAPHDMLDWV RAMREEEEGT EDNRLGMMTE TACLCRVTSP EQRPTMRQVI KMIQEIKESV MAEENDPFR
Arabidopsis Description
Probable inactive receptor kinase At5g67200 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y06]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.