CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68400.1	CDX73678	AT3G51920.1	17360592
AT1G68400.1	CDX95314	AT3G51920.1	17360592
AT1G68400.1	CDY23174	AT3G51920.1	17360592
AT1G68400.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033940.1-P	Field mustard	cytosol	49.92	100.0
CDX81508	Canola	plasma membrane	97.18	90.57
AT1G68400.1	Thale cress	plasma membrane	83.91	75.52
VIT_01s0011g03860.t01	Wine grape	plasma membrane	69.15	62.15
Solyc05g009100.2.1	Tomato	plasma membrane	66.83	60.33
PGSC0003DMT400037779	Potato	plasma membrane	66.83	59.88
Os01t0133900-00	Rice	extracellular	11.94	57.14
KRG94239	Soybean	vacuole	58.21	54.67
KRH38161	Soybean	plasma membrane	59.37	54.41
GSMUA_Achr8P17920_001	Banana	plasma membrane	46.1	50.92
GSMUA_Achr1P21110_001	Banana	plasma membrane	50.41	50.84
GSMUA_Achr11P...	Banana	plasma membrane	42.45	49.23
TraesCS3B01G046700.1	Wheat	plasma membrane	52.07	46.73
TraesCS3D01G042500.1	Wheat	plasma membrane	51.74	46.5
TraesCS3A01G037200.1	Wheat	plasma membrane	51.58	46.28
CDY03526	Canola	cytosol	19.24	45.31
CDY10964	Canola	cytosol	10.61	44.14
EES02541	Sorghum	plasma membrane	51.58	43.8
CDX77054	Canola	plasma membrane	44.61	43.6
Zm00001d039967_P001	Maize	plasma membrane	47.6	43.29
CDY02808	Canola	plastid	29.35	42.04
CDX79688	Canola	plasma membrane	44.28	41.46
CDY04464	Canola	plasma membrane	42.62	40.66
CDX84553	Canola	plasma membrane	44.11	40.49
CDY48185	Canola	plasma membrane	44.11	40.49
HORVU3Hr1G007120.2	Barley	cytosol, peroxisome	52.24	40.28
CDY25569	Canola	mitochondrion	22.55	40.24
CDY67567	Canola	plasma membrane	38.31	39.62
CDY34407	Canola	mitochondrion	22.22	39.41
CDY35996	Canola	plasma membrane	40.63	38.58
CDY27986	Canola	plasma membrane	40.3	38.51
CDY35028	Canola	mitochondrion	14.93	38.14
CDX88667	Canola	plasma membrane	39.47	38.08
CDX92167	Canola	plasma membrane	38.81	37.5
CDX98821	Canola	plasma membrane	38.97	37.42
CDY61284	Canola	plasma membrane	39.14	37.34
CDX70172	Canola	plasma membrane	38.47	37.18
CDY49655	Canola	plasma membrane	37.81	36.95
CDX95816	Canola	plasma membrane	36.15	36.95
CDY08366	Canola	plasma membrane	35.99	36.84
CDX69441	Canola	plasma membrane	37.65	36.73
CDY38186	Canola	plasma membrane	35.99	36.72
CDY32713	Canola	plasma membrane	39.64	36.71
CDY28719	Canola	plasma membrane	36.65	36.59
CDX94213	Canola	plasma membrane	37.31	36.59
CDY58565	Canola	plasma membrane	39.47	36.45
CDX85498	Canola	plasma membrane	36.98	36.38
CDY51524	Canola	plasma membrane	37.31	36.29
CDY38103	Canola	plasma membrane	36.82	36.22
CDY54343	Canola	plasma membrane	35.82	36.18
CDY47068	Canola	plasma membrane	35.82	36.12
CDY22372	Canola	cytosol	17.58	35.93
CDX77309	Canola	plasma membrane	38.47	35.91
CDY41827	Canola	plasma membrane	38.31	35.7
CDX71536	Canola	cytosol	17.41	35.59
CDX71488	Canola	plasma membrane	42.29	34.88
CDX67503	Canola	cytosol, mitochondrion	22.06	34.64
CDY47625	Canola	plasma membrane	37.31	33.99
CDY34130	Canola	cytosol, plastid	34.33	33.6
CDY19849	Canola	plasma membrane	34.16	33.17
CDY24545	Canola	plasma membrane	34.99	32.76
CDX87143	Canola	plasma membrane	33.66	32.69
CDX97916	Canola	plasma membrane	34.99	31.97
CDY19325	Canola	plasma membrane	34.16	31.79
CDX81336	Canola	plasma membrane	32.17	31.14
CDX83117	Canola	plasma membrane	32.17	29.62
CDY01430	Canola	plasma membrane	33.33	29.39
CDX68581	Canola	plasma membrane	31.34	28.94
CDX71537	Canola	extracellular	12.94	27.37

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:A0A078I6Y6	UniProt:A0A078I6Y6
EnsemblPlants:CDY44903	ProteinID:CDY44903	ProteinID:CDY44903.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00081058001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	PFAM:PF00069	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDB4DF
SEG:seg	:	:	:	:	:

Description

BnaA02g13790DBnaA02g13790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6Y6]

Coordinates

chrLK032605:+:199821..203233

Molecular Weight (calculated)

66020.8 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.226

Length

603 amino acids

Sequence
(BLAST)

001: MEKLSFFSQH LLLSLLLLYC FLSSSSSSDL EALLNFKSAA DSTGKLYTWN STTDPLKRNR FSGPVPDISN LTALKLLFLS ENQFSGEFPA SVTSLTRLYR
101: LDLSFNNFSG EIPPTLTHLT HLLTLRLETN RFSGQIPDIS LPDLQDFNVS DNNLVGRIPN SLSEFPTSVF GQNPSLCGAP LVKCNEPTKP GQPDRATASP
201: LNNPETIPSS PTSVHTAKDG DKSSTARIST LALVAIILGD VIILSLVSLL LYCCFWRQYA ANRKKPSKVL EGEKIVYSSS PYPTAAQNSG NNQQQQGGER
301: GRMVFFEGTR RFELEDLLRA SAEMLGKGGF GTAYKAVLDD GNEVAVKRLK DAVNVTGKKE FEQQMEVLGR LRHSNLVSLK AYYFAREEKL LVCEYMPNGS
401: LFWLLHGNRG PGRTPLDWTT RLKIAAGAAR GVAFIHNSCK TLKLTHGDIK STNVLLDGSG NARLLDGRKP TQKSDVYSFG VLLLEILTGK CPNLVETGHS
501: GGAMDLPRWV QSVVREEWTA EVFDLELMRY KDIEEEMVGL LQIAMACTAA TADHRPKMGH VVKMIEEIRG GGSETSPCND GINSAAESSP CLSEDTCGGT
601: TSQ

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.