Factsheet for GSMUA_Achr8P17920_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68400.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT1G68400.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	67.4	70.77
GSMUA_Achr1P21110_001	Banana	plasma membrane	74.36	67.89
Bra033940.1-P	Field mustard	cytosol	34.07	61.79
Os01t0133900-00	Rice	extracellular	11.36	49.21
TraesCS3B01G046700.1	Wheat	plasma membrane	58.97	47.92
TraesCS3A01G037200.1	Wheat	plasma membrane	57.69	46.88
TraesCS3D01G042500.1	Wheat	plasma membrane	57.33	46.65
VIT_01s0011g03860.t01	Wine grape	plasma membrane	56.96	46.35
CDY44903	Canola	plasma membrane	50.92	46.1
EES02541	Sorghum	plasma membrane	58.79	45.21
CDX81508	Canola	plasma membrane	53.3	44.98
Zm00001d039967_P001	Maize	plasma membrane	54.58	44.95
Solyc05g009100.2.1	Tomato	plasma membrane	54.58	44.61
KRH35919	Soybean	plasma membrane	54.76	44.49
PGSC0003DMT400037779	Potato	plasma membrane	54.76	44.43
KRG94239	Soybean	vacuole	51.65	43.93
AT1G68400.1	Thale cress	plasma membrane	53.11	43.28
KRH38161	Soybean	plasma membrane	51.83	43.01
GSMUA_AchrUn_...	Banana	plasma membrane	36.63	40.9
HORVU3Hr1G007120.2	Barley	cytosol, peroxisome	58.06	40.54
GSMUA_Achr3P07440_001	Banana	plasma membrane	37.91	39.96
GSMUA_Achr8P19840_001	Banana	plasma membrane	34.43	39.33
GSMUA_Achr3P20630_001	Banana	golgi, plasma membrane, vacuole	37.73	38.79
GSMUA_Achr4P08980_001	Banana	plasma membrane	35.16	38.79
GSMUA_Achr3P02160_001	Banana	plasma membrane	33.7	38.25
GSMUA_Achr10P...	Banana	plasma membrane	39.74	37.67
GSMUA_Achr6P05910_001	Banana	extracellular, plasma membrane, vacuole	38.83	37.66
GSMUA_Achr6P25170_001	Banana	plasma membrane	35.16	37.57
GSMUA_Achr9P15690_001	Banana	plasma membrane	38.28	37.32
KRG90862	Soybean	mitochondrion	45.79	37.31
GSMUA_Achr5P09830_001	Banana	plasma membrane	39.74	36.72
GSMUA_Achr3P09720_001	Banana	plasma membrane	39.93	36.52
GSMUA_Achr10P...	Banana	plasma membrane	34.98	36.04
GSMUA_Achr7P21970_001	Banana	plasma membrane	33.88	35.85
GSMUA_Achr2P21610_001	Banana	plasma membrane	39.56	35.7
GSMUA_Achr7P11160_001	Banana	plasma membrane	34.43	35.21
GSMUA_Achr8P23000_001	Banana	plasma membrane	34.62	34.24
GSMUA_Achr1P17850_001	Banana	plasma membrane	33.15	33.21
GSMUA_Achr7P14210_001	Banana	plasma membrane	33.33	32.27
GSMUA_Achr5P06820_001	Banana	plasma membrane	33.33	31.38
GSMUA_Achr7P20790_001	Banana	plasma membrane	33.7	31.35
GSMUA_Achr4P09880_001	Banana	plasma membrane	34.62	31.29
GSMUA_Achr3P14030_001	Banana	plasma membrane	34.07	29.67
GSMUA_Achr10P...	Banana	golgi, plasma membrane	33.33	28.3
GSMUA_Achr9P25250_001	Banana	plastid	32.42	27.4
GSMUA_Achr11P...	Banana	plasma membrane	41.21	27.21

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G17920_001	EnsemblPlants:GSMUA_Achr8P17920_001	EnsemblPlants:GSMUA_Achr8T17920_001
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M0TRE5
PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF44
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	UniParc:UPI00029545D0
SEG:seg	:	:	:	:	:

Description

Putative Probable inactive receptor kinase At2g26730 [Source:GMGC_GENE;Acc:GSMUA_Achr8G17920_001]

Coordinates

chr8:+:19782765..19784998

Molecular Weight (calculated)

57564.0 Da

IEP (calculated)

6.515

GRAVY (calculated)

0.086

Length

546 amino acids

Sequence
(BLAST)

001: MLLLFLVLVN FSSMAVSSSS LGTLEGDLSA LQEFKAACDS GGRLASWNRS DPSPCASWHG VTCAGGRLRV LSLKSNRLSG PIPDLSPFST LKLLFLAHNE
101: LSGPIPPSVA SLSRLYRLDF GSNNLTGPVP ASLNHLNLSS NLLSGAVPPS LAAFPAAAFT GNPALCGGPL PTCRDVVSDP SRPSASAAAP VSPAAVVVAS
201: SPVAVVAIVV GDFAVLVLGE KIVYSSSPYA VQGNEAGSAA GSGFERGKMI FFEETKRFEL EDLLRASAEM LGKGGYGTAY RAVLDDSTVV AVKRLREVHV
301: AGKREFENQM ETLGRLRHPN LVPLKAYYYA RDEKLLVYDY MPNGSLFFLL HGNRGPGRTP LDWTTRMRMA VGAARGLAFI HQASRSPKLT HGNIKSTNIL
401: LDKDGNARLA DAGLALLGPG AAALLTGKPA ADGGASAVDL PRWVQSVVRE EWTAEVFDLE LMRYKGIEEE IVTMLQIAMS CTAVVPDQRP TMSNVVKMIE
501: NIHGGGAGGD LSPSHDSFDS VSDSPSGSDV PSSLTSIVID IPFDAA

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.