Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63322 | Soybean | extracellular | 15.57 | 79.52 |
| Zm00001d003674_P001 | Maize | extracellular | 49.06 | 77.04 |
| KRH57934 | Soybean | cytosol, nucleus | 97.64 | 74.33 |
| GSMUA_Achr11P... | Banana | cytosol | 83.96 | 68.73 |
| CDY63965 | Canola | cytosol | 83.49 | 68.08 |
| GSMUA_Achr2P08220_001 | Banana | cytosol | 83.96 | 66.42 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 87.03 | 65.78 |
| PGSC0003DMT400010254 | Potato | cytosol | 85.85 | 65.23 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 85.38 | 64.87 |
| CDY46076 | Canola | cytosol | 83.73 | 63.85 |
| Bra039198.1-P | Field mustard | cytosol | 83.73 | 63.85 |
| KRH77015 | Soybean | cytosol | 83.49 | 63.44 |
| AT2G23420.1 | Thale cress | cytosol | 83.02 | 63.2 |
| CDY66512 | Canola | cytosol | 82.31 | 62.77 |
| Solyc03g044430.2.1 | Tomato | cytosol | 83.73 | 62.72 |
| AT4G36940.1 | Thale cress | cytosol | 82.31 | 62.43 |
| CDY29537 | Canola | cytosol | 82.55 | 62.28 |
| Bra017808.1-P | Field mustard | cytosol | 76.89 | 61.98 |
| Zm00001d034777_P005 | Maize | cytosol | 81.37 | 61.94 |
| Os04t0429800-01 | Rice | plasma membrane, plastid | 81.37 | 61.28 |
| TraesCS2A01G302400.1 | Wheat | cytosol, peroxisome, plastid | 81.6 | 61.13 |
| TraesCS2B01G318300.2 | Wheat | cytosol, peroxisome, plastid | 81.6 | 61.13 |
| TraesCS2D01G301100.1 | Wheat | golgi | 81.6 | 61.13 |
| KXG26318 | Sorghum | cytosol, plastid | 82.08 | 61.05 |
| OQU90665 | Sorghum | peroxisome | 81.37 | 60.95 |
| Os03t0837300-02 | Rice | plasma membrane | 79.95 | 60.54 |
| TraesCS4A01G354500.1 | Wheat | peroxisome | 80.66 | 59.27 |
| TraesCS5B01G517900.3 | Wheat | peroxisome | 80.42 | 59.1 |
| TraesCS5D01G517600.1 | Wheat | peroxisome | 80.19 | 58.93 |
| Zm00001d025412_P001 | Maize | plastid | 81.6 | 53.73 |
| KRH28456 | Soybean | extracellular | 18.16 | 40.74 |
| Zm00001d003675_P001 | Maize | plastid | 16.04 | 30.49 |
| HORVU2Hr1G074990.1 | Barley | plastid | 5.19 | 20.95 |
Protein Annotations
| KEGG:00760+6.3.4.21 | EntrezGene:100797545 | Gene3D:3.20.140.10 | Gene3D:3.20.20.70 | MapMan:7.9.2.2 | EMBL:ACUP02010458 |
| InterPro:Aldolase_TIM | EnsemblPlantsGene:GLYMA_17G172500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004514 | GO:GO:0004516 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009435 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019358 | InterPro:IPR013785 | UniProt:K7MM50 | EnsemblPlants:KRH04597 | ProteinID:KRH04597 |
| ProteinID:KRH04597.1 | InterPro:Nic_PRibTrfase-Fam | InterPro:Nic_PRibTrfase_pncB | InterPro:Nicotinate_pribotase_like_C | PFAM:PF04095 | PIRSF:PIRSF000484 |
| PANTHER:PTHR11098 | PANTHER:PTHR11098:SF17 | MetaCyc:PWY-5381 | SUPFAM:SSF51690 | SUPFAM:SSF54675 | TIGRFAMs:TIGR01513 |
| UniParc:UPI000295A010 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:17619827..17628579
Molecular Weight (calculated)
47025.3 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.144
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVEGPVAVV QLLETPFVNL INYASLVSTN AARHRNVAGK SKTLLEFGLR RAQGPDGGVG ASKYCYIGGF DATSNVAAGK LFGIPLRGTH SHAFVSSYMS
101: LDEITDRSLN RKDGSSTCDD FVSLVQTWLN KIQLSNGVFG ETNQSELAAF TSYALAFPDG FLALVDTYDV MRSGIPNFCA VALALSDLGY KAVGIRLDSG
201: DLAYLSCEVR KFFYSIENEF GVPGFGKLQI TASNDLNEET LDALNKQGHE VDAFGIGTYL VTCYAQAALG VVFKLVEINN QPRIKLSEDV SKVSIPCKKC
301: CYRLYGKEGY PLVDIMTGEN EPSPKVGERI LCRHPFQESK RAYVVPQRVE ELLRCYWSGS TDIKKDTLPA LRDIRERCIN QLEQMRPDHM RRLNPTPYKV
401: SVSAKLYDFI HFLWLNEAPV GELQ
101: LDEITDRSLN RKDGSSTCDD FVSLVQTWLN KIQLSNGVFG ETNQSELAAF TSYALAFPDG FLALVDTYDV MRSGIPNFCA VALALSDLGY KAVGIRLDSG
201: DLAYLSCEVR KFFYSIENEF GVPGFGKLQI TASNDLNEET LDALNKQGHE VDAFGIGTYL VTCYAQAALG VVFKLVEINN QPRIKLSEDV SKVSIPCKKC
301: CYRLYGKEGY PLVDIMTGEN EPSPKVGERI LCRHPFQESK RAYVVPQRVE ELLRCYWSGS TDIKKDTLPA LRDIRERCIN QLEQMRPDHM RRLNPTPYKV
401: SVSAKLYDFI HFLWLNEAPV GELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.