CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36511	Soybean	cytosol	93.74	87.34
KRH35776	Soybean	cytosol	92.28	86.52
KRG90981	Soybean	nucleus	89.35	84.09
CDY52036	Canola	cytosol, plastid	17.84	72.04
VIT_01s0011g02040.t01	Wine grape	cytosol	78.03	71.99
Solyc04g005690.2.1	Tomato	cytosol, nucleus	72.57	70.96
PGSC0003DMT400007349	Potato	cytosol	75.23	70.36
CDY45277	Canola	cytosol, plastid	17.31	70.27
Bra026198.1-P	Field mustard	cytosol, plastid	17.18	70.11
Solyc02g081960.2.1	Tomato	cytosol, nucleus	71.5	69.83
PGSC0003DMT400018892	Potato	cytosol	74.43	69.7
GSMUA_Achr3P03970_001	Banana	cytosol	70.84	67.94
CDX84019	Canola	cytosol	16.78	67.38
GSMUA_Achr9P12650_001	Banana	cytosol	69.64	64.81
CDY41093	Canola	cytosol	66.58	64.77
AT1G14650.1	Thale cress	cytosol	67.38	64.46
Bra016688.1-P	Field mustard	cytosol	59.12	64.16
AT5G06890.1	Thale cress	cytosol	5.59	63.64
CDY52037	Canola	cytosol	23.97	60.4
TraesCS3B01G212000.1	Wheat	cytosol	45.81	59.52
AT1G14640.1	Thale cress	cytosol	57.92	59.18
Os02t0245000-01	Rice	cytosol	61.52	58.33
EES00535	Sorghum	cytosol	61.65	57.66
CDY45276	Canola	cytosol	22.1	57.64
Zm00001d040343_P003	Maize	cytosol	61.92	57.62
Zm00001d008293_P001	Maize	cytosol	61.65	57.44
TraesCS3A01G503600.1	Wheat	cytosol	60.32	57.27
TraesCS3D01G510100.1	Wheat	cytosol	60.19	56.93
TraesCS3B01G211900.1	Wheat	cytosol	57.79	56.58
HORVU3Hr1G110920.1	Barley	cytosol	60.05	55.07
TraesCS3B01G566900.1	Wheat	cytosol	60.19	54.59
CDX84020	Canola	nucleus	15.31	53.74
CDY62788	Canola	cytosol	6.39	40.68
CDY71524	Canola	cytosol	13.71	36.4
KXG32223	Sorghum	nucleus, plastid	9.05	35.6
CDY65449	Canola	cytosol	17.84	33.84
CDX89545	Canola	cytosol	7.19	32.14
CDX89548	Canola	cytosol	7.19	32.14
CDY38929	Canola	cytosol	7.19	31.95
AT5G12280.1	Thale cress	cytosol	17.58	31.5
Bra023557.1-P	Field mustard	mitochondrion	9.45	29.83
Bra000608.1-P	Field mustard	cytosol	2.8	29.58
CDY21434	Canola	cytosol	2.8	29.58
Bra032181.1-P	Field mustard	cytosol	8.39	29.17
AT3G49130.1	Thale cress	cytosol	11.72	28.66
CDY21696	Canola	cytosol	12.38	27.27
CDY38128	Canola	cytosol	14.51	27.25
CDY09657	Canola	cytosol, nucleus, plastid	16.38	26.97
CDY09653	Canola	nucleus	16.38	25.15
Bra031050.1-P	Field mustard	cytosol	13.18	24.87
CDX83169	Canola	plasma membrane	3.46	24.76
CDY69291	Canola	cytosol, golgi	5.46	24.7
AT3G27600.1	Thale cress	cytosol	10.12	24.28
CDX81896	Canola	cytosol	6.52	21.21
CDY58992	Canola	cytosol	6.52	21.12
AT4G16200.1	Thale cress	nucleus	7.72	20.14
CDY58090	Canola	cytosol	13.98	20.11
Bra007503.1-P	Field mustard	cytosol	13.98	20.08
CDY44531	Canola	cytosol	14.65	19.75
CDX71843	Canola	cytosol	5.73	19.72
CDY72308	Canola	cytosol	16.78	19.3
CDX71844	Canola	cytosol, golgi, plasma membrane	4.66	17.33
CDY38126	Canola	cytosol	18.24	16.63
AT5G06520.1	Thale cress	cytosol	13.98	15.46
AT1G18050.1	Thale cress	nucleus	2.93	9.82

Protein Annotations

Gene3D:1.10.10.790	EntrezGene:100790309	MapMan:16.4.1.2.3.1	Gene3D:3.10.20.90	UniProt:A0A0R0GC27	EMBL:ACUP02009319
EMBL:ACUP02009320	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G173200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:IPR000061	InterPro:IPR000626	InterPro:IPR035967	ProteinID:KRH12469.1	EnsemblPlants:KRH12470
ProteinID:KRH12470	ProteinID:KRH12470.1	PFAM:PF00240	PFAM:PF01805	PFAM:PF12230	PRINTS:PR01217
PFscan:PS50053	PFscan:PS50128	PANTHER:PTHR15316	PANTHER:PTHR15316:SF1	InterPro:SF3A1	SMART:SM00213
SMART:SM00648	SUPFAM:SSF109905	SUPFAM:SSF54236	InterPro:SWAP/Surp_sf	InterPro:Surp	UniParc:UPI0006ED9B90
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:15879880..15884753

Molecular Weight (calculated)

83387.1 Da

IEP (calculated)

5.202

GRAVY (calculated)

-0.585

Length

751 amino acids

Sequence
(BLAST)

001: MMLGSLPILP LPAPPSDGNL GPLPESQVIE EEQNQSNSAS VPAPVTVATH TRTIGIIHPP PDIRTIVDKT AQFVAKNGPE FEKRIVANNT GNAKFNFLNS
101: SDPYHAYYQH RPVRKVLEPL KPNCIQFGFL KELRGKELDI IKLTAQFVAR NGKSFLTGLT SREVNNPQFH FLKPTHSMFT FFTSLADAYS KVLMPPKGLT
201: EKLKKSVSDM TTVLERCVNR LEWERSQEQA RQKAEDEIEQ ERIQMAMIDW HDFVVVETID FADDEDQELP PPMTIEEVIR RSKVTAMEED IVEPGKEVEM
301: EMDEEEAQLV EEGMRAASLE DHDDRKQNEV RVTEDPEPPM RIVKNWKRPE ERISVERDST KFVVSPITGE LIPISEMSEH MRISLIDPKY KEQKERMFAK
401: IRETTLAADD EISRNIVGLA RTRPDIFGTT EEEVSNAVKA EIEKINDEQP KQVIWDGHTG SIGRTANQAM SQNIGNEDQN DASNNEARNL LGPAAPPPRP
501: GMPSVRPLPP PPGLALNLPR VPIQYSAPHS GALPMPPPRP MMPSIRPAPP PPMPMNTGQQ SVMAGQPPPM HPSIPMNNQG IPIPPPPGSQ FTHVPVPRPF
601: VPLSVPPSVM PMMHPPPLPQ GLPPPPPPEE APPPLPEEPE PKRQKLDDSA LIPEDQFLAQ HPGPVRISVS VPNVDEGNLK GQVLEITVLS LSETVGSLKE
701: KIAGEIQLPA NKQKLSGKPG FLKDNMSLAH YNVGGGETLT LTLRERGGRK R

Best Arabidopsis Sequence Match ( AT1G14640.2 )
(BLAST)

001: MFNSMKILPL EAPPADGNLG PLPPSQLTDE EIKENEFQGE QNNSIQTPIA VATHTNPIGI IYPPPEIRKI VETTAQFVSQ NGLAFGNKVK TEKANNANFS
101: FLKSDNPYHG FYRYKVTEYS CHIRDGAQGT DVDDTEDPKL DDESDAKPDL QAQFRAPRKI LEAPEPEKYT VRLPEGIMEA ELDIIKHTAQ FVARNGQSFL
201: RELMRREVNN SQFQFMKPTH SMFTFFTSLV DAYSEVLMPP RDLKEKLRKS VADLTTVLER CLNRLEWDRF QEEEKNKEED EKEKERVQMV MIDWKDFAVV
301: ESIDFADEED KDLPMPMTLE EVIRRSKVSA MEEDEIVEPG KEVEMDMDEE EVKLVAEGMR AANLEEYVGS VEIEEEAPMR IVKNWKRPED RFLTERDSSK
401: VVISRITGEL IPITEMSEHM RISLIDPKFK EQKDRMFAKI RETTLAQDDE IAKNIVGLAR LRPDIFGTTE EEVSNAVKAD IEKKDEQPKQ VIWDGHTGSI
501: GRTANQALTQ NSNGEQGDGV YGDPNSFPGP AAFPPPRPGV PTVRPLPPPQ NLALNLPRPP PSVQYPGAPR PLGVPMMQPM YQQHQLSMSG PHGHPSMMMS
601: RPPQMQPVMR VPPPPGSQFS HMQVPQPYGQ LPPLSMGMMQ PPPMAEMPPP PPPGEAPPPL PEEPEPKRQK LDESALVPED QFLAQHPGPA TIRVSKPNEN
701: DGQVMEITVQ SLSENVGSLK EKIAGEMQIP ANKQK

Arabidopsis Description

SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HW92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.