Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G12280.1 | Thale cress | cytosol | 75.76 | 11.93 |
| AT3G27600.1 | Thale cress | cytosol | 37.88 | 7.99 |
| AT1G14650.1 | Thale cress | cytosol | 71.21 | 5.99 |
| TraesCS3B01G212000.1 | Wheat | cytosol | 51.52 | 5.88 |
| KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 63.64 | 5.59 |
| KRH36511 | Soybean | cytosol | 66.67 | 5.46 |
| KRG90981 | Soybean | nucleus | 65.15 | 5.39 |
| KRH35776 | Soybean | cytosol | 65.15 | 5.37 |
| Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 62.12 | 5.33 |
| VIT_01s0011g02040.t01 | Wine grape | cytosol | 65.15 | 5.28 |
| Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 60.61 | 5.21 |
| PGSC0003DMT400007349 | Potato | cytosol | 62.12 | 5.11 |
| PGSC0003DMT400018892 | Potato | cytosol | 60.61 | 4.99 |
| GSMUA_Achr3P03970_001 | Banana | cytosol | 57.58 | 4.85 |
| GSMUA_Achr9P12650_001 | Banana | cytosol | 57.58 | 4.71 |
| TraesCS3B01G211900.1 | Wheat | cytosol | 50.0 | 4.3 |
| TraesCS3A01G503600.1 | Wheat | cytosol | 51.52 | 4.3 |
| TraesCS3D01G510100.1 | Wheat | cytosol | 51.52 | 4.28 |
| HORVU3Hr1G110920.1 | Barley | cytosol | 51.52 | 4.15 |
| TraesCS3B01G566900.1 | Wheat | cytosol | 51.52 | 4.11 |
| Os02t0245000-01 | Rice | cytosol | 48.48 | 4.04 |
| EES00535 | Sorghum | cytosol | 48.48 | 3.99 |
| Zm00001d040343_P003 | Maize | cytosol | 48.48 | 3.97 |
| Zm00001d008293_P001 | Maize | cytosol | 46.97 | 3.85 |
| AT4G16200.1 | Thale cress | nucleus | 16.67 | 3.82 |
| AT1G14640.1 | Thale cress | cytosol | 42.42 | 3.81 |
| CDX71843 | Canola | cytosol | 4.55 | 1.38 |
| AT1G18050.1 | Thale cress | nucleus | 4.55 | 1.34 |
| AT5G06520.1 | Thale cress | cytosol | 12.12 | 1.18 |
| CDY69291 | Canola | cytosol, golgi | 1.52 | 0.6 |
| KXG32223 | Sorghum | nucleus, plastid | 1.52 | 0.52 |
| AT3G49130.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT5G06890 | EnsemblPlants:AT5G06890.1 | EnsemblPlantsGene:AT5G06890 | EntrezGene:830579 | Gene3D:3.10.20.90 | InterPro:Ubiquitin-like_domsf |
| ncoils:Coil | ProteinID:AED91078.1 | ProteinID:BAB11146.1 | RefSeq:AT5G06890 | RefSeq:AT5G06890-TAIR-G | RefSeq:NP_196306.1 |
| SUPFAM:SSF54236 | TAIR:AT5G06890 | TAIR:AT5G06890.1 | Unigene:At.54753 | UniParc:UPI000009CD87 | UniProt:Q9FL57 |
| MapMan:35.1 | : | : | : | : | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FL57]
Coordinates
chr5:+:2135743..2135943
Molecular Weight (calculated)
7192.7 Da
IEP (calculated)
7.538
GRAVY (calculated)
-0.162
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSVPDVNDG QVIEITVQSL SENVASLKEK VANKLKLRGK AGILKDDDKS LAHYNVRAGD ILTLSW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.