Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71843 | Canola | cytosol | 22.29 | 16.97 |
| AT3G49130.1 | Thale cress | cytosol | 22.89 | 12.38 |
| CDY45276 | Canola | cytosol | 20.48 | 11.81 |
| CDX81896 | Canola | cytosol | 16.27 | 11.69 |
| CDX84020 | Canola | nucleus | 15.06 | 11.68 |
| CDY58992 | Canola | cytosol | 16.27 | 11.64 |
| CDY52037 | Canola | cytosol | 18.07 | 10.07 |
| CDY38128 | Canola | cytosol | 21.69 | 9.0 |
| CDY21696 | Canola | cytosol | 18.07 | 8.8 |
| CDY71524 | Canola | cytosol | 14.46 | 8.48 |
| CDY21434 | Canola | cytosol | 3.61 | 8.45 |
| CDX89545 | Canola | cytosol | 8.43 | 8.33 |
| CDX89548 | Canola | cytosol | 8.43 | 8.33 |
| CDY38929 | Canola | cytosol | 8.43 | 8.28 |
| CDX71844 | Canola | cytosol, golgi, plasma membrane | 9.04 | 7.43 |
| AT5G12280.1 | Thale cress | cytosol | 17.47 | 6.92 |
| CDY65449 | Canola | cytosol | 15.06 | 6.31 |
| CDY62788 | Canola | cytosol | 4.22 | 5.93 |
| AT3G27600.1 | Thale cress | cytosol | 10.84 | 5.75 |
| CDX83169 | Canola | plasma membrane | 3.61 | 5.71 |
| CDY09657 | Canola | cytosol, nucleus, plastid | 15.66 | 5.7 |
| Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 25.3 | 5.47 |
| KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 24.7 | 5.46 |
| Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 24.7 | 5.33 |
| PGSC0003DMT400007349 | Potato | cytosol | 25.3 | 5.23 |
| CDY72308 | Canola | cytosol | 20.48 | 5.21 |
| CDY41093 | Canola | cytosol | 24.1 | 5.18 |
| VIT_01s0011g02040.t01 | Wine grape | cytosol | 25.3 | 5.16 |
| KRG90981 | Soybean | nucleus | 24.7 | 5.14 |
| CDY09653 | Canola | nucleus | 15.06 | 5.11 |
| PGSC0003DMT400018892 | Potato | cytosol | 24.7 | 5.11 |
| GSMUA_Achr3P03970_001 | Banana | cytosol | 24.1 | 5.11 |
| KRH35776 | Soybean | cytosol | 24.1 | 4.99 |
| CDY58090 | Canola | cytosol | 15.66 | 4.98 |
| KRH36511 | Soybean | cytosol | 24.1 | 4.96 |
| TraesCS3B01G211900.1 | Wheat | cytosol | 22.89 | 4.95 |
| GSMUA_Achr9P12650_001 | Banana | cytosol | 23.49 | 4.83 |
| KXG32223 | Sorghum | nucleus, plastid | 5.42 | 4.71 |
| Os02t0245000-01 | Rice | cytosol | 22.29 | 4.67 |
| EES00535 | Sorghum | cytosol | 22.29 | 4.61 |
| Zm00001d008293_P001 | Maize | cytosol | 21.69 | 4.47 |
| Zm00001d040343_P003 | Maize | cytosol | 21.69 | 4.46 |
| CDY44531 | Canola | cytosol | 14.46 | 4.31 |
| TraesCS3A01G503600.1 | Wheat | cytosol | 20.48 | 4.3 |
| TraesCS3D01G510100.1 | Wheat | cytosol | 20.48 | 4.28 |
| TraesCS3B01G566900.1 | Wheat | cytosol | 21.08 | 4.23 |
| HORVU3Hr1G110920.1 | Barley | cytosol | 20.48 | 4.15 |
| TraesCS3B01G212000.1 | Wheat | cytosol | 13.25 | 3.81 |
| CDX84019 | Canola | cytosol | 4.22 | 3.74 |
| CDY45277 | Canola | cytosol, plastid | 3.61 | 3.24 |
| AT5G06520.1 | Thale cress | cytosol | 13.25 | 3.24 |
| CDY38126 | Canola | cytosol | 13.86 | 2.79 |
| CDY52036 | Canola | cytosol, plastid | 2.41 | 2.15 |
| AT5G06890.1 | Thale cress | cytosol | 0.6 | 1.52 |
Protein Annotations
| EnsemblPlants:CDY69291 | EnsemblPlantsGene:GSBRNA2T00086176001 | ProteinID:CDY69291 | ProteinID:CDY69291.1 | UniParc:UPI0004EE3962 | UniProt:A0A078JUQ4 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng62870DBnaCnng62870D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUQ4]
Coordinates
chrLK039057:+:304..1318
Molecular Weight (calculated)
19235.0 Da
IEP (calculated)
5.050
GRAVY (calculated)
-0.343
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: HPIPTFIILI NRILHKHQRL SVMIKNHQPT LGILVMLPLG PKISDSPHSS RSQCSRLEYN FPPEIRPDEL GVYQAHSAVC NKKVDTRAVL KFMEPSDGRF
101: HLYEMAVDAY SKVLKDSDAD TETVIERYFQ CLQWEEEQKT LDDLYGFVEG VDCFAQMEDE YFSEII
101: HLYEMAVDAY SKVLKDSDAD TETVIERYFQ CLQWEEEQKT LDDLYGFVEG VDCFAQMEDE YFSEII
001: MVDLFDFVGG GNYSAAMPPP ERLSVMIMNR VAQTQPDMVL QLPLGSQLTI PAKGITLKEL GVMKLTAQSS VRYGFDFWCG LWKRVYMNPL FQFLNPSDSR
101: SDFYNGFTAA YSRVLKPSKK LKKFDACTAT VLEGFFHRLH LFKLEEGVET AMIDLHGFVY GVDCFAHMAD DNYSAIMDPP ERPSMMINQL TQIQRNAPAP
201: HEKCLKRSYN FPYAFGGGIS LKELDLMKKV VMKPQFKFME PTNSVFGLYN VVVDAYSRVV KPSDDAYASM GMMQTARPEE PEAKRQKFDE SALNPEGAVR
301: RRHSRWQ
101: SDFYNGFTAA YSRVLKPSKK LKKFDACTAT VLEGFFHRLH LFKLEEGVET AMIDLHGFVY GVDCFAHMAD DNYSAIMDPP ERPSMMINQL TQIQRNAPAP
201: HEKCLKRSYN FPYAFGGGIS LKELDLMKKV VMKPQFKFME PTNSVFGLYN VVVDAYSRVV KPSDDAYASM GMMQTARPEE PEAKRQKFDE SALNPEGAVR
301: RRHSRWQ
Arabidopsis Description
SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SMU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.