CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45277	Canola	cytosol, plastid	83.87	84.32
CDX84019	Canola	cytosol	83.33	82.89
CDY71524	Canola	cytosol	34.41	22.61
CDY41093	Canola	cytosol	83.33	20.08
KRH12470	Soybean	cytosol, endoplasmic reticulum, nucleus	72.04	17.84
TraesCS3B01G212000.1	Wheat	cytosol	54.84	17.65
KRH35776	Soybean	cytosol	72.58	16.85
CDY65449	Canola	cytosol	35.48	16.67
KRH36511	Soybean	cytosol	72.04	16.63
KRG90981	Soybean	nucleus	70.97	16.54
Solyc02g081960.2.1	Tomato	cytosol, nucleus	66.13	15.99
VIT_01s0011g02040.t01	Wine grape	cytosol	69.89	15.97
Solyc04g005690.2.1	Tomato	cytosol, nucleus	65.59	15.89
PGSC0003DMT400007349	Potato	cytosol	66.67	15.44
PGSC0003DMT400018892	Potato	cytosol	65.59	15.21
GSMUA_Achr3P03970_001	Banana	cytosol	63.44	15.07
GSMUA_Achr9P12650_001	Banana	cytosol	63.98	14.75
CDY09657	Canola	cytosol, nucleus, plastid	33.33	13.6
TraesCS3A01G503600.1	Wheat	cytosol	56.45	13.27
TraesCS3D01G510100.1	Wheat	cytosol	56.45	13.22
TraesCS3B01G211900.1	Wheat	cytosol	53.23	12.91
Os02t0245000-01	Rice	cytosol	54.3	12.75
TraesCS3B01G566900.1	Wheat	cytosol	56.45	12.68
HORVU3Hr1G110920.1	Barley	cytosol	55.38	12.58
CDY09653	Canola	nucleus	32.8	12.47
EES00535	Sorghum	cytosol	53.23	12.33
Zm00001d040343_P003	Maize	cytosol	52.69	12.14
Zm00001d008293_P001	Maize	cytosol	52.15	12.03
CDY38128	Canola	cytosol	20.97	9.75
CDY58090	Canola	cytosol	26.88	9.58
CDY72308	Canola	cytosol	30.11	8.58
CDY62788	Canola	cytosol	5.38	8.47
CDY44531	Canola	cytosol	24.73	8.26
CDX83169	Canola	plasma membrane	3.23	5.71
CDY38126	Canola	cytosol	25.27	5.7
CDY21434	Canola	cytosol	2.15	5.63
CDX84020	Canola	nucleus	4.3	3.74
CDX71843	Canola	cytosol	4.3	3.67
KXG32223	Sorghum	nucleus, plastid	3.76	3.66
CDX81896	Canola	cytosol	4.3	3.46
CDY58992	Canola	cytosol	4.3	3.45
CDY21696	Canola	cytosol	5.91	3.23
CDY69291	Canola	cytosol, golgi	2.15	2.41
CDX89548	Canola	cytosol	2.15	2.38
CDX89545	Canola	cytosol	2.15	2.38
CDY38929	Canola	cytosol	2.15	2.37
CDY45276	Canola	cytosol	3.23	2.08
CDY52037	Canola	cytosol	2.69	1.68
CDX71844	Canola	cytosol, golgi, plasma membrane	1.08	0.99

Protein Annotations

EnsemblPlants:CDY52036	EnsemblPlantsGene:GSBRNA2T00004742001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PFAM:PF00240	PFscan:PS50053	ProteinID:CDY52036
ProteinID:CDY52036.1	SEG:seg	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0004EDFBB0	UniProt:A0A078IQ46
MapMan:35.1	:	:	:	:	:

Description

BnaA08g31490DBnaA08g31490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ46]

Coordinates

chrLK033048:-:70255..71149

Molecular Weight (calculated)

20058.4 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.619

Length

186 amino acids

Sequence
(BLAST)

001: MPGQPGHPSM MMMNRPPQMQ AGMHVPPPPG SQFAHLQVPR PYGQLAPPPM GMMQPPPMHG MPPPPPPGEA PPPLPEEPEP KRQKFDESAL IPEEQFLAQH
101: PGSATIRVSV PSVDDGQVIE ITVQSLSENV GSLKEKIAGE TQIPANKQKL SGKAGFLKDN MSLAHYNVGA GEILTLSLRE RGGRKR

Best Arabidopsis Sequence Match ( AT1G14640.1 )
(BLAST)

001: MFNSMKILPL EAPPADGNLG PLPPSQLTDE EIKENEFQGE QNNSIQTPIA VATHTNPIGI IYPPPEIRKI VETTAQFVSQ NGLAFGNKVK TEKANNANFS
101: FLKSDNPYHG FYRYKVTEYS CHIRDGAQGT DVDDTEDPKL DDESDAKPDL QAQFRAPRKI LEAPEPEKYT VRLPEGIMEA ELDIIKHTAQ FVARNGQSFL
201: RELMRREVNN SQFQFMKPTH SMFTFFTSLV DAYSEVLMPP RDLKEKLRKS VADLTTVLER CLNRLEWDRF QEEEKNKEED EKEKERVQMV MIDWKDFAVV
301: ESIDFADEED KDLPMPMTLE EVIRRSKVSA MEEDEIVEPG KEVEMDMDEE EVKLVAEGMR AANLEEYVGS VEIEEEAPMR IVKNWKRPED RFLTERDSSK
401: VVISRITGEL IPITEMSEHM RISLIDPKFK EQKDRMFAKI RETTLAQDDE IAKNIVGLAR LRPDIFGTTE EEVSNAVKAD IEKKDEQPKQ VIWDGHTGSI
501: GRTANQALTQ NSNGEQGDGV YGDPNSFPGP AAFPPPRPGV PTVRPLPPPQ NLALNLPRPP PSVQYPGAPR PLGVPMMQPM YQQHQLSMSG PHGHPSMMMS
601: RPPQMQPVMR VPPPPGSQFS HMQVPQPYGQ LPPLSMGMMQ PPPMAEMPPP PPPGEAPPPL PEEPEPKRQK LDESALVPED QFLAQHPGPA TIRVSKPNEN
701: DGQVMEITVQ SLSENVGSLK EKIAGEMQIP ANKQK

Arabidopsis Description

SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HW92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.