Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY09657 | Canola | cytosol, nucleus, plastid | 84.05 | 90.13 |
CDY65449 | Canola | cytosol | 40.49 | 50.0 |
CDX84019 | Canola | cytosol | 13.09 | 34.22 |
CDY45277 | Canola | cytosol, plastid | 12.47 | 32.97 |
CDY52036 | Canola | cytosol, plastid | 12.47 | 32.8 |
CDY52037 | Canola | cytosol | 14.93 | 24.5 |
CDY62788 | Canola | cytosol | 5.73 | 23.73 |
CDX84020 | Canola | nucleus | 10.02 | 22.9 |
CDY71524 | Canola | cytosol | 13.09 | 22.61 |
CDY45276 | Canola | cytosol | 12.88 | 21.88 |
CDX89545 | Canola | cytosol | 6.75 | 19.64 |
CDX89548 | Canola | cytosol | 6.54 | 19.05 |
CDY38929 | Canola | cytosol | 6.54 | 18.93 |
CDY41093 | Canola | cytosol | 28.43 | 18.01 |
CDY21434 | Canola | cytosol | 2.45 | 16.9 |
KXG32223 | Sorghum | nucleus, plastid | 6.54 | 16.75 |
CDY21696 | Canola | cytosol | 11.66 | 16.72 |
KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 25.15 | 16.38 |
KRH36511 | Soybean | cytosol | 26.99 | 16.38 |
KRH35776 | Soybean | cytosol | 26.79 | 16.35 |
KRG90981 | Soybean | nucleus | 26.58 | 16.29 |
Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 25.15 | 16.02 |
Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 25.15 | 15.99 |
PGSC0003DMT400007349 | Potato | cytosol | 25.56 | 15.57 |
VIT_01s0011g02040.t01 | Wine grape | cytosol | 25.77 | 15.48 |
PGSC0003DMT400018892 | Potato | cytosol | 25.15 | 15.34 |
CDY69291 | Canola | cytosol, golgi | 5.11 | 15.06 |
TraesCS3B01G211900.1 | Wheat | cytosol | 23.31 | 14.86 |
TraesCS3D01G510100.1 | Wheat | cytosol | 24.13 | 14.86 |
TraesCS3A01G503600.1 | Wheat | cytosol | 23.93 | 14.79 |
Os02t0245000-01 | Rice | cytosol | 23.93 | 14.77 |
EES00535 | Sorghum | cytosol | 24.13 | 14.69 |
GSMUA_Achr3P03970_001 | Banana | cytosol | 23.31 | 14.56 |
Zm00001d040343_P003 | Maize | cytosol | 23.52 | 14.25 |
Zm00001d008293_P001 | Maize | cytosol | 23.31 | 14.14 |
GSMUA_Achr9P12650_001 | Banana | cytosol | 23.31 | 14.13 |
TraesCS3B01G566900.1 | Wheat | cytosol | 23.52 | 13.89 |
CDX81896 | Canola | cytosol | 6.54 | 13.85 |
CDY58992 | Canola | cytosol | 6.54 | 13.79 |
HORVU3Hr1G110920.1 | Barley | cytosol | 22.9 | 13.68 |
CDX83169 | Canola | plasma membrane | 2.86 | 13.33 |
TraesCS3B01G212000.1 | Wheat | cytosol | 14.31 | 12.11 |
CDY58090 | Canola | cytosol | 12.88 | 12.07 |
CDY72308 | Canola | cytosol | 15.95 | 11.94 |
CDY44531 | Canola | cytosol | 13.29 | 11.67 |
CDY38128 | Canola | cytosol | 8.38 | 10.25 |
CDX71844 | Canola | cytosol, golgi, plasma membrane | 3.89 | 9.41 |
CDX71843 | Canola | cytosol | 4.09 | 9.17 |
CDY38126 | Canola | cytosol | 10.84 | 6.43 |
Protein Annotations
Gene3D:1.10.10.790 | Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078FCA7 | UniProt:A0A078FCA7 | EnsemblPlants:CDY09653 |
ProteinID:CDY09653 | ProteinID:CDY09653.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
EnsemblPlantsGene:GSBRNA2T00031302001 | InterPro:IPR000061 | InterPro:IPR000626 | InterPro:IPR035967 | PFAM:PF00240 | PFAM:PF01805 |
PFscan:PS50053 | PFscan:PS50128 | PANTHER:PTHR15316 | PANTHER:PTHR15316:SF1 | SMART:SM00213 | SMART:SM00648 |
SUPFAM:SSF109905 | SUPFAM:SSF54236 | InterPro:SWAP/Surp_sf | InterPro:Surp | UniParc:UPI0004EDDD88 | InterPro:Ubiquitin-like_domsf |
InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
BnaC07g34080DBnaC07g34080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCA7]
Coordinates
chrLK031998:-:241749..243913
Molecular Weight (calculated)
55514.8 Da
IEP (calculated)
10.024
GRAVY (calculated)
-0.409
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNFILFLKK KGKKKWKKKK LVASLYIVCD PPERKTVIYY EIVYIKRKLK PYKRRKDDYA AADWIPIISR HSQLCRLGKL QNREGVRSFS LLSFFFFGGS
101: PVEVRRFLSS YSFSISERAY LKKMAEDGII QPPEDIATKT IVEKTASFLS RNKVDKSEIM PSDVRYNFLR SKTDPSHAYY SYMLSKYSDA HSQGGGGAVE
201: SIGGAAVNIE PDDHTKDLTI INTPAQVPAI TLAARVAYLV STQGVDFEMQ LRDSQVNDTR FNFLRDASHV CHAYYQRSLA YLSFGNKSQL KARAQPPPVF
301: NTPNSSIFPV FQRAYEILFK PPKDTKEQLY KSAEYTDAIQ KGFLQRIQLD DPIKERKWLE QGERAMIDWH DATSKPFAMK EAQELLPPQG PDPKRQKLEV
401: SLLVPETQFL AQHQGLSSLT VSFPNRQAVV IKVSSLSANV ASLKQIIAEV IQIPADKHKL SAKSGVLKDD NMTLAHYNVR DGDILTLSL
101: PVEVRRFLSS YSFSISERAY LKKMAEDGII QPPEDIATKT IVEKTASFLS RNKVDKSEIM PSDVRYNFLR SKTDPSHAYY SYMLSKYSDA HSQGGGGAVE
201: SIGGAAVNIE PDDHTKDLTI INTPAQVPAI TLAARVAYLV STQGVDFEMQ LRDSQVNDTR FNFLRDASHV CHAYYQRSLA YLSFGNKSQL KARAQPPPVF
301: NTPNSSIFPV FQRAYEILFK PPKDTKEQLY KSAEYTDAIQ KGFLQRIQLD DPIKERKWLE QGERAMIDWH DATSKPFAMK EAQELLPPQG PDPKRQKLEV
401: SLLVPETQFL AQHQGLSSLT VSFPNRQAVV IKVSSLSANV ASLKQIIAEV IQIPADKHKL SAKSGVLKDD NMTLAHYNVR DGDILTLSL
001: MSTSTLQSEQ SMEIITPPAD IGTRTLVDKA AQFVSKKGLE FETKIIDSYP TDAKFNFLRS TADPCHTYYK HKLAEYSSQN QDGATDESDI KIFHAPPNVT
101: TTAIVETTSC LVSQFGSEFE MMVKDSNTDD ARFNFLKSSE DPYNVLYKQK LDEYSLDPRD AYYQHKLAES ISKYHREATP KLVLPNLLQF RLVKEMTFEE
201: LDTVKVTAQF VAWYGDDFRG FLMERVMTEP QFEFMKATDY RFSFYNEFVV AYSQVLNPPK YLKDKLRGRA AYTVIGHLLI TMSEEEIS
101: TTAIVETTSC LVSQFGSEFE MMVKDSNTDD ARFNFLKSSE DPYNVLYKQK LDEYSLDPRD AYYQHKLAES ISKYHREATP KLVLPNLLQF RLVKEMTFEE
201: LDTVKVTAQF VAWYGDDFRG FLMERVMTEP QFEFMKATDY RFSFYNEFVV AYSQVLNPPK YLKDKLRGRA AYTVIGHLLI TMSEEEIS
Arabidopsis Description
SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O23467]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.