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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09657 Canola cytosol, nucleus, plastid 84.05 90.13
CDY65449 Canola cytosol 40.49 50.0
CDX84019 Canola cytosol 13.09 34.22
CDY45277 Canola cytosol, plastid 12.47 32.97
CDY52036 Canola cytosol, plastid 12.47 32.8
CDY52037 Canola cytosol 14.93 24.5
CDY62788 Canola cytosol 5.73 23.73
CDX84020 Canola nucleus 10.02 22.9
CDY71524 Canola cytosol 13.09 22.61
CDY45276 Canola cytosol 12.88 21.88
CDX89545 Canola cytosol 6.75 19.64
CDX89548 Canola cytosol 6.54 19.05
CDY38929 Canola cytosol 6.54 18.93
CDY41093 Canola cytosol 28.43 18.01
CDY21434 Canola cytosol 2.45 16.9
KXG32223 Sorghum nucleus, plastid 6.54 16.75
CDY21696 Canola cytosol 11.66 16.72
KRH12470 Soybean cytosol, endoplasmic reticulum, nucleus 25.15 16.38
KRH36511 Soybean cytosol 26.99 16.38
KRH35776 Soybean cytosol 26.79 16.35
KRG90981 Soybean nucleus 26.58 16.29
Solyc04g005690.2.1 Tomato cytosol, nucleus 25.15 16.02
Solyc02g081960.2.1 Tomato cytosol, nucleus 25.15 15.99
PGSC0003DMT400007349 Potato cytosol 25.56 15.57
VIT_01s0011g02040.t01 Wine grape cytosol 25.77 15.48
PGSC0003DMT400018892 Potato cytosol 25.15 15.34
CDY69291 Canola cytosol, golgi 5.11 15.06
TraesCS3B01G211900.1 Wheat cytosol 23.31 14.86
TraesCS3D01G510100.1 Wheat cytosol 24.13 14.86
TraesCS3A01G503600.1 Wheat cytosol 23.93 14.79
Os02t0245000-01 Rice cytosol 23.93 14.77
EES00535 Sorghum cytosol 24.13 14.69
GSMUA_Achr3P03970_001 Banana cytosol 23.31 14.56
Zm00001d040343_P003 Maize cytosol 23.52 14.25
Zm00001d008293_P001 Maize cytosol 23.31 14.14
GSMUA_Achr9P12650_001 Banana cytosol 23.31 14.13
TraesCS3B01G566900.1 Wheat cytosol 23.52 13.89
CDX81896 Canola cytosol 6.54 13.85
CDY58992 Canola cytosol 6.54 13.79
HORVU3Hr1G110920.1 Barley cytosol 22.9 13.68
CDX83169 Canola plasma membrane 2.86 13.33
TraesCS3B01G212000.1 Wheat cytosol 14.31 12.11
CDY58090 Canola cytosol 12.88 12.07
CDY72308 Canola cytosol 15.95 11.94
CDY44531 Canola cytosol 13.29 11.67
CDY38128 Canola cytosol 8.38 10.25
CDX71844 Canola cytosol, golgi, plasma membrane 3.89 9.41
CDX71843 Canola cytosol 4.09 9.17
CDY38126 Canola cytosol 10.84 6.43
Protein Annotations
Gene3D:1.10.10.790Gene3D:3.10.20.90MapMan:35.1GO:A0A078FCA7UniProt:A0A078FCA7EnsemblPlants:CDY09653
ProteinID:CDY09653ProteinID:CDY09653.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488
GO:GO:0005515GO:GO:0006139GO:GO:0006396GO:GO:0008150GO:GO:0008152GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00031302001InterPro:IPR000061InterPro:IPR000626InterPro:IPR035967PFAM:PF00240PFAM:PF01805
PFscan:PS50053PFscan:PS50128PANTHER:PTHR15316PANTHER:PTHR15316:SF1SMART:SM00213SMART:SM00648
SUPFAM:SSF109905SUPFAM:SSF54236InterPro:SWAP/Surp_sfInterPro:SurpUniParc:UPI0004EDDD88InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_domSEG:seg::::
Description
BnaC07g34080DBnaC07g34080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCA7]
Coordinates
chrLK031998:-:241749..243913
Molecular Weight (calculated)
55514.8 Da
IEP (calculated)
10.024
GRAVY (calculated)
-0.409
Length
489 amino acids
Sequence
(BLAST)
001: MPNFILFLKK KGKKKWKKKK LVASLYIVCD PPERKTVIYY EIVYIKRKLK PYKRRKDDYA AADWIPIISR HSQLCRLGKL QNREGVRSFS LLSFFFFGGS
101: PVEVRRFLSS YSFSISERAY LKKMAEDGII QPPEDIATKT IVEKTASFLS RNKVDKSEIM PSDVRYNFLR SKTDPSHAYY SYMLSKYSDA HSQGGGGAVE
201: SIGGAAVNIE PDDHTKDLTI INTPAQVPAI TLAARVAYLV STQGVDFEMQ LRDSQVNDTR FNFLRDASHV CHAYYQRSLA YLSFGNKSQL KARAQPPPVF
301: NTPNSSIFPV FQRAYEILFK PPKDTKEQLY KSAEYTDAIQ KGFLQRIQLD DPIKERKWLE QGERAMIDWH DATSKPFAMK EAQELLPPQG PDPKRQKLEV
401: SLLVPETQFL AQHQGLSSLT VSFPNRQAVV IKVSSLSANV ASLKQIIAEV IQIPADKHKL SAKSGVLKDD NMTLAHYNVR DGDILTLSL
Best Arabidopsis Sequence Match ( AT4G16200.1 )
(BLAST)
001: MSTSTLQSEQ SMEIITPPAD IGTRTLVDKA AQFVSKKGLE FETKIIDSYP TDAKFNFLRS TADPCHTYYK HKLAEYSSQN QDGATDESDI KIFHAPPNVT
101: TTAIVETTSC LVSQFGSEFE MMVKDSNTDD ARFNFLKSSE DPYNVLYKQK LDEYSLDPRD AYYQHKLAES ISKYHREATP KLVLPNLLQF RLVKEMTFEE
201: LDTVKVTAQF VAWYGDDFRG FLMERVMTEP QFEFMKATDY RFSFYNEFVV AYSQVLNPPK YLKDKLRGRA AYTVIGHLLI TMSEEEIS
Arabidopsis Description
SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O23467]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.