Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58090 | Canola | cytosol | 76.84 | 81.99 |
| CDX71844 | Canola | cytosol, golgi, plasma membrane | 23.88 | 65.84 |
| CDY52036 | Canola | cytosol, plastid | 8.26 | 24.73 |
| CDX84019 | Canola | cytosol | 8.08 | 24.06 |
| CDY21434 | Canola | cytosol | 3.05 | 23.94 |
| CDY72308 | Canola | cytosol | 26.75 | 22.82 |
| CDY71524 | Canola | cytosol | 11.49 | 22.61 |
| CDY45277 | Canola | cytosol, plastid | 7.36 | 22.16 |
| CDX81896 | Canola | cytosol | 8.98 | 21.64 |
| CDY58992 | Canola | cytosol | 8.98 | 21.55 |
| CDY65449 | Canola | cytosol | 14.0 | 19.7 |
| CDY62788 | Canola | cytosol | 3.77 | 17.8 |
| CDX84020 | Canola | nucleus | 6.64 | 17.29 |
| CDX71843 | Canola | cytosol | 6.64 | 16.97 |
| CDY38128 | Canola | cytosol | 11.85 | 16.5 |
| CDX83169 | Canola | plasma membrane | 3.05 | 16.19 |
| CDX89548 | Canola | cytosol | 4.85 | 16.07 |
| CDX89545 | Canola | cytosol | 4.85 | 16.07 |
| CDY38929 | Canola | cytosol | 4.85 | 15.98 |
| CDY09657 | Canola | cytosol, nucleus, plastid | 12.75 | 15.57 |
| CDY45276 | Canola | cytosol | 7.9 | 15.28 |
| CDY21696 | Canola | cytosol | 9.34 | 15.25 |
| CDY52037 | Canola | cytosol | 8.08 | 15.1 |
| KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 19.75 | 14.65 |
| CDY69291 | Canola | cytosol, golgi | 4.31 | 14.46 |
| TraesCS3B01G212000.1 | Wheat | cytosol | 14.72 | 14.19 |
| KRH35776 | Soybean | cytosol | 19.57 | 13.61 |
| CDY41093 | Canola | cytosol | 18.67 | 13.47 |
| CDY09653 | Canola | nucleus | 11.67 | 13.29 |
| KRG90981 | Soybean | nucleus | 19.03 | 13.28 |
| KRH36511 | Soybean | cytosol | 19.21 | 13.28 |
| TraesCS3B01G211900.1 | Wheat | cytosol | 17.77 | 12.91 |
| VIT_01s0011g02040.t01 | Wine grape | cytosol | 18.85 | 12.9 |
| GSMUA_Achr3P03970_001 | Banana | cytosol | 18.13 | 12.9 |
| PGSC0003DMT400007349 | Potato | cytosol | 18.49 | 12.83 |
| Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 17.59 | 12.76 |
| Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 17.59 | 12.74 |
| PGSC0003DMT400018892 | Potato | cytosol | 18.13 | 12.59 |
| GSMUA_Achr9P12650_001 | Banana | cytosol | 17.95 | 12.39 |
| EES00535 | Sorghum | cytosol | 17.59 | 12.2 |
| Zm00001d008293_P001 | Maize | cytosol | 17.41 | 12.03 |
| Zm00001d040343_P003 | Maize | cytosol | 17.06 | 11.77 |
| Os02t0245000-01 | Rice | cytosol | 16.52 | 11.62 |
| TraesCS3A01G503600.1 | Wheat | cytosol | 16.34 | 11.5 |
| TraesCS3D01G510100.1 | Wheat | cytosol | 16.34 | 11.46 |
| HORVU3Hr1G110920.1 | Barley | cytosol | 16.52 | 11.23 |
| TraesCS3B01G566900.1 | Wheat | cytosol | 16.52 | 11.11 |
| CDY38126 | Canola | cytosol | 13.64 | 9.22 |
| KXG32223 | Sorghum | nucleus, plastid | 3.05 | 8.9 |
Protein Annotations
| Gene3D:1.10.10.790 | Gene3D:3.10.20.90 | MapMan:35.2 | GO:A0A078I3W5 | UniProt:A0A078I3W5 | EnsemblPlants:CDY44531 |
| ProteinID:CDY44531 | ProteinID:CDY44531.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00080321001 |
| InterPro:IPR000061 | InterPro:IPR035967 | PFAM:PF01805 | PFscan:PS50128 | PANTHER:PTHR15316 | PANTHER:PTHR15316:SF1 |
| SMART:SM00648 | SUPFAM:SSF109905 | SUPFAM:SSF54236 | InterPro:SWAP/Surp_sf | InterPro:Surp | UniParc:UPI0004EF4951 |
| InterPro:Ubiquitin-like_domsf | SEG:seg | : | : | : | : |
Description
BnaCnng11420DBnaCnng11420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3W5]
Coordinates
chrLK032593:+:170902..173076
Molecular Weight (calculated)
63914.4 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.114
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQFGGYDCC TEKAMQYLTL EPGKVPEALK LYAEAFQAKL VDDSYEDQSV QLKILNSYVL ITPWVSASGS SDSFLELPTD LNSIRRIRED KRFVEIDRTS
101: STENKRVMMK DPFGITFLLR MEKKKMTRYV VDHGLLFRRA CNPIAFGFPQ GISPNDLCTI KLTALFVTRY GMGFRKALKK IASTEFAFLN LNHIWRRLFF
201: NFVGVYTSIV KPSEVVYRSC DFMGKALELF FHLLQLKNVK MGGSRTVMEV DAFTGGVDYF AYMDFVGYSD VMPRPQRRSV MIAQLGHTLR TPLSAPFPSW
301: STIFFVSPEV LGIIKLTALF VARYGKRIAC ELMEKVGRNP LFSFLDPSDC GFPCYNMVVK VYSKVLKNFE LVYTADIVLQ RYFQSLWDEE KDEPKDLDDL
401: YSFVECVDSF AQMEDEEFYH KMGSRQAYVN PLLRNSLIDH QAHVYPFHDQ TSRVYFRDQT SPANVQEEGP SSIKVCVPTL DGRVIIEIIV ESFFGGKVAS
501: LKEKIVKVIQ IPSKYLKLRG KSVGVLRDDK SLADNNVEAR EILTATWRFS RWEVEIA
101: STENKRVMMK DPFGITFLLR MEKKKMTRYV VDHGLLFRRA CNPIAFGFPQ GISPNDLCTI KLTALFVTRY GMGFRKALKK IASTEFAFLN LNHIWRRLFF
201: NFVGVYTSIV KPSEVVYRSC DFMGKALELF FHLLQLKNVK MGGSRTVMEV DAFTGGVDYF AYMDFVGYSD VMPRPQRRSV MIAQLGHTLR TPLSAPFPSW
301: STIFFVSPEV LGIIKLTALF VARYGKRIAC ELMEKVGRNP LFSFLDPSDC GFPCYNMVVK VYSKVLKNFE LVYTADIVLQ RYFQSLWDEE KDEPKDLDDL
401: YSFVECVDSF AQMEDEEFYH KMGSRQAYVN PLLRNSLIDH QAHVYPFHDQ TSRVYFRDQT SPANVQEEGP SSIKVCVPTL DGRVIIEIIV ESFFGGKVAS
501: LKEKIVKVIQ IPSKYLKLRG KSVGVLRDDK SLADNNVEAR EILTATWRFS RWEVEIA
001: MVDLFDFVGG GNYSAAMPPP ERLSVMIMNR VAQTQPDMVL QLPLGSQLTI PAKGITLKEL GVMKLTAQSS VRYGFDFWCG LWKRVYMNPL FQFLNPSDSR
101: SDFYNGFTAA YSRVLKPSKK LKKFDACTAT VLEGFFHRLH LFKLEEGVET AMIDLHGFVY GVDCFAHMAD DNYSAIMDPP ERPSMMINQL TQIQRNAPAP
201: HEKCLKRSYN FPYAFGGGIS LKELDLMKKV VMKPQFKFME PTNSVFGLYN VVVDAYSRVV KPSDDAYASM GMMQTARPEE PEAKRQKFDE SALNPEGAVR
301: RRHSRWQ
101: SDFYNGFTAA YSRVLKPSKK LKKFDACTAT VLEGFFHRLH LFKLEEGVET AMIDLHGFVY GVDCFAHMAD DNYSAIMDPP ERPSMMINQL TQIQRNAPAP
201: HEKCLKRSYN FPYAFGGGIS LKELDLMKKV VMKPQFKFME PTNSVFGLYN VVVDAYSRVV KPSDDAYASM GMMQTARPEE PEAKRQKFDE SALNPEGAVR
301: RRHSRWQ
Arabidopsis Description
SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SMU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.