Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09657 | Canola | cytosol, nucleus, plastid | 52.27 | 45.39 |
| CDY09653 | Canola | nucleus | 50.0 | 40.49 |
| CDX84019 | Canola | cytosol | 17.17 | 36.36 |
| CDY52036 | Canola | cytosol, plastid | 16.67 | 35.48 |
| CDY45277 | Canola | cytosol, plastid | 15.91 | 34.05 |
| CDX89548 | Canola | cytosol | 13.13 | 30.95 |
| CDX84020 | Canola | nucleus | 16.41 | 30.37 |
| CDX89545 | Canola | cytosol | 12.88 | 30.36 |
| CDY71524 | Canola | cytosol | 21.46 | 30.04 |
| CDY62788 | Canola | cytosol | 8.84 | 29.66 |
| CDY38929 | Canola | cytosol | 12.12 | 28.4 |
| CDY52037 | Canola | cytosol | 18.18 | 24.16 |
| CDY45276 | Canola | cytosol | 16.41 | 22.57 |
| CDY21434 | Canola | cytosol | 4.04 | 22.54 |
| CDX81896 | Canola | cytosol | 12.37 | 21.21 |
| CDY58992 | Canola | cytosol | 12.37 | 21.12 |
| CDY21696 | Canola | cytosol | 16.67 | 19.35 |
| CDY41093 | Canola | cytosol | 36.11 | 18.52 |
| CDX83169 | Canola | plasma membrane | 4.8 | 18.1 |
| KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 33.84 | 17.84 |
| KRH35776 | Soybean | cytosol | 35.1 | 17.35 |
| KRH36511 | Soybean | cytosol | 35.1 | 17.25 |
| Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 33.33 | 17.19 |
| KRG90981 | Soybean | nucleus | 34.6 | 17.17 |
| Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 32.83 | 16.91 |
| PGSC0003DMT400018892 | Potato | cytosol | 33.84 | 16.71 |
| PGSC0003DMT400007349 | Potato | cytosol | 33.84 | 16.69 |
| VIT_01s0011g02040.t01 | Wine grape | cytosol | 34.09 | 16.58 |
| GSMUA_Achr3P03970_001 | Banana | cytosol | 31.31 | 15.84 |
| GSMUA_Achr9P12650_001 | Banana | cytosol | 31.06 | 15.24 |
| TraesCS3B01G212000.1 | Wheat | cytosol | 22.22 | 15.22 |
| TraesCS3B01G211900.1 | Wheat | cytosol | 29.29 | 15.12 |
| CDY69291 | Canola | cytosol, golgi | 6.31 | 15.06 |
| TraesCS3D01G510100.1 | Wheat | cytosol | 30.05 | 14.99 |
| Os02t0245000-01 | Rice | cytosol | 29.8 | 14.9 |
| Zm00001d040343_P003 | Maize | cytosol | 30.3 | 14.87 |
| CDX71844 | Canola | cytosol, golgi, plasma membrane | 7.58 | 14.85 |
| EES00535 | Sorghum | cytosol | 29.8 | 14.69 |
| TraesCS3A01G503600.1 | Wheat | cytosol | 29.29 | 14.66 |
| HORVU3Hr1G110920.1 | Barley | cytosol | 30.3 | 14.65 |
| Zm00001d008293_P001 | Maize | cytosol | 29.55 | 14.52 |
| KXG32223 | Sorghum | nucleus, plastid | 6.82 | 14.14 |
| TraesCS3B01G566900.1 | Wheat | cytosol | 29.55 | 14.13 |
| CDY44531 | Canola | cytosol | 19.7 | 14.0 |
| CDY58090 | Canola | cytosol | 18.43 | 13.98 |
| CDY38128 | Canola | cytosol | 13.89 | 13.75 |
| CDY72308 | Canola | cytosol | 22.22 | 13.48 |
| CDX71843 | Canola | cytosol | 7.32 | 13.3 |
| CDY38126 | Canola | cytosol | 18.69 | 8.98 |
Protein Annotations
| Gene3D:1.10.10.790 | Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078JFH3 | UniProt:A0A078JFH3 | EnsemblPlants:CDY65449 |
| ProteinID:CDY65449 | ProteinID:CDY65449.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00046624001 | InterPro:IPR000061 | InterPro:IPR000626 | InterPro:IPR035967 | PFAM:PF00240 | PFAM:PF01805 |
| PFscan:PS50053 | PFscan:PS50128 | PANTHER:PTHR15316 | PANTHER:PTHR15316:SF1 | SMART:SM00213 | SMART:SM00648 |
| SUPFAM:SSF109905 | SUPFAM:SSF54236 | InterPro:SWAP/Surp_sf | InterPro:Surp | UniParc:UPI0004EDACE1 | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
BnaA03g58090DBnaA03g58090D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JFH3]
Coordinates
chrLK034794:-:17844..19368
Molecular Weight (calculated)
44858.9 Da
IEP (calculated)
9.334
GRAVY (calculated)
-0.321
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: ILKTIVEKTA SFLSRNKMDK SEIMPSDVRY NFLRSKTDPS HAYYSYMLSK YSAGGGAVVE GAADLTIINT PAQVPAITLA ARVACLVSVK GLDLEMHLRD
101: TQVSDTRFNF LRDASDVCHA FYQRSLAYYS FGNKSQLKAR AQPPPVFDTP NTQILPLPNL LQFRLPQGMT LKQLDTIKVT AQFSLWYGYY FVWALKGNVT
201: QLEFLNPSHS WYPFYNEFQR AYERLFKPPK DTIEQLYKSA EYTEAIQKGF LQRIQLDDPI KVRKWLEQGE RAMIDWHDAT SKPFAMKEVQ ELLPPQGPDP
301: KRQKLDVSLL VPETQFLAQH QGPSSLTVSF PNRQAVEIKV SSLSVNLASL KQRIAEVIQI PADKHKLSGK SGVLKDDNMT LAHYNVGDGD ILTLSL
101: TQVSDTRFNF LRDASDVCHA FYQRSLAYYS FGNKSQLKAR AQPPPVFDTP NTQILPLPNL LQFRLPQGMT LKQLDTIKVT AQFSLWYGYY FVWALKGNVT
201: QLEFLNPSHS WYPFYNEFQR AYERLFKPPK DTIEQLYKSA EYTEAIQKGF LQRIQLDDPI KVRKWLEQGE RAMIDWHDAT SKPFAMKEVQ ELLPPQGPDP
301: KRQKLDVSLL VPETQFLAQH QGPSSLTVSF PNRQAVEIKV SSLSVNLASL KQRIAEVIQI PADKHKLSGK SGVLKDDNMT LAHYNVGDGD ILTLSL
001: MSTSTLQSEQ SMEIITPPAD IGTRTLVDKA AQFVSKKGLE FETKIIDSYP TDAKFNFLRS TADPCHTYYK HKLAEYSSQN QDGATDESDI KIFHAPPNVT
101: TTAIVETTSC LVSQFGSEFE MMVKDSNTDD ARFNFLKSSE DPYNVLYKQK LDEYSLDPRD AYYQHKLAES ISKYHREATP KLVLPNLLQF RLVKEMTFEE
201: LDTVKVTAQF VAWYGDDFRG FLMERVMTEP QFEFMKATDY RFSFYNEFVV AYSQVLNPPK YLKDKLRGRA AYTVIGHLLI TMSEEEIS
101: TTAIVETTSC LVSQFGSEFE MMVKDSNTDD ARFNFLKSSE DPYNVLYKQK LDEYSLDPRD AYYQHKLAES ISKYHREATP KLVLPNLLQF RLVKEMTFEE
201: LDTVKVTAQF VAWYGDDFRG FLMERVMTEP QFEFMKATDY RFSFYNEFVV AYSQVLNPPK YLKDKLRGRA AYTVIGHLLI TMSEEEIS
Arabidopsis Description
SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O23467]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.