CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007503.1-P	Field mustard	cytosol	98.28	98.09
CDY44531	Canola	cytosol	81.99	76.84
CDX71844	Canola	cytosol, golgi, plasma membrane	23.75	61.39
CDY52036	Canola	cytosol, plastid	9.58	26.88
CDX84019	Canola	cytosol	9.39	26.2
CDY45277	Canola	cytosol, plastid	8.62	24.32
CDY21434	Canola	cytosol	3.26	23.94
CDY71524	Canola	cytosol	12.64	23.32
CDY72308	Canola	cytosol	28.54	22.82
CDX81896	Canola	cytosol	8.62	19.48
CDY58992	Canola	cytosol	8.62	19.4
CDY65449	Canola	cytosol	13.98	18.43
CDX89545	Canola	cytosol	5.36	16.67
CDX84020	Canola	nucleus	6.7	16.36
CDY38128	Canola	cytosol	12.45	16.25
CDX83169	Canola	plasma membrane	3.26	16.19
CDX89548	Canola	cytosol	5.17	16.07
CDX71843	Canola	cytosol	6.7	16.05
CDY38929	Canola	cytosol	5.17	15.98
CDY69291	Canola	cytosol, golgi	4.98	15.66
CDY45276	Canola	cytosol	8.43	15.28
CDY62788	Canola	cytosol	3.45	15.25
CDY21696	Canola	cytosol	9.96	15.25
CDY09657	Canola	cytosol, nucleus, plastid	13.22	15.13
CDY52037	Canola	cytosol	8.43	14.77
KRH12470	Soybean	cytosol, endoplasmic reticulum, nucleus	20.11	13.98
TraesCS3B01G212000.1	Wheat	cytosol	15.33	13.84
CDY41093	Canola	cytosol	20.11	13.6
KRH35776	Soybean	cytosol	19.92	12.98
PGSC0003DMT400007349	Potato	cytosol	19.92	12.95
KRH36511	Soybean	cytosol	19.92	12.9
Solyc04g005690.2.1	Tomato	cytosol, nucleus	18.97	12.89
CDY09653	Canola	nucleus	12.07	12.88
KRG90981	Soybean	nucleus	19.54	12.78
Solyc02g081960.2.1	Tomato	cytosol, nucleus	18.77	12.74
VIT_01s0011g02040.t01	Wine grape	cytosol	19.73	12.65
GSMUA_Achr3P03970_001	Banana	cytosol	18.97	12.64
PGSC0003DMT400018892	Potato	cytosol	19.35	12.59
TraesCS3B01G211900.1	Wheat	cytosol	18.2	12.39
GSMUA_Achr9P12650_001	Banana	cytosol	18.97	12.27
EES00535	Sorghum	cytosol	18.77	12.2
Zm00001d040343_P003	Maize	cytosol	18.39	11.9
Zm00001d008293_P001	Maize	cytosol	18.2	11.79
TraesCS3A01G503600.1	Wheat	cytosol	17.24	11.38
TraesCS3D01G510100.1	Wheat	cytosol	17.24	11.34
Os02t0245000-01	Rice	cytosol	17.05	11.24
HORVU3Hr1G110920.1	Barley	cytosol	17.62	11.23
TraesCS3B01G566900.1	Wheat	cytosol	17.43	10.99
CDY38126	Canola	cytosol	13.79	8.74
KXG32223	Sorghum	nucleus, plastid	2.87	7.85

Protein Annotations

Gene3D:1.10.10.790	Gene3D:3.10.20.90	MapMan:35.2	GO:A0A078J5D0	UniProt:A0A078J5D0	EnsemblPlants:CDY58090
ProteinID:CDY58090	ProteinID:CDY58090.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00023069001
InterPro:IPR000061	InterPro:IPR035967	PFAM:PF01805	PFscan:PS50128	PANTHER:PTHR15316	PANTHER:PTHR15316:SF1
SMART:SM00648	SUPFAM:SSF109905	SUPFAM:SSF54236	InterPro:SWAP/Surp_sf	InterPro:Surp	UniParc:UPI0004EEBD54
InterPro:Ubiquitin-like_domsf	SEG:seg	:	:	:	:

Description

BnaA09g55450DBnaA09g55450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5D0]

Coordinates

chrLK033634:+:13611..15524

Molecular Weight (calculated)

59843.3 Da

IEP (calculated)

7.269

GRAVY (calculated)

-0.151

Length

522 amino acids

Sequence
(BLAST)

001: MTQFGGYDYC TEKAMQYLTL EPGKVPEALK LYAEAFQANA SGSSDSFLEL PTDLNSIRRI REDKRFVEID RTRSTEDKSV MMKDPFGITF LLRVEKKKMT
101: GSVVDHGLLF RRACNPIAFG FPQGISPNDL CTIKLTALFV TRYGMAFKKA LKKIASTEFG FLNLNHIWRR LFFNFVGVYT SIVKPSKEVY RSCDFMGKAL
201: ELFFHLLQLK NVKMGGSRRV MEVDAFTGGV DYFAYMDFVG YSDVMPRPQR RSVMIAQLGH TLRTPLSASW CTTIFFVSPE VLGIIKLTAL FVARYGKRIA
301: CELMEKEGRN PLFSFLDPSD CGFPCYNMVV QVYSKVLKNF ELVYTADIVL QRYFQSLWDE EKDEPKDVDD LYSFVECVDS FAQMEDEEFF HKMGTREAHV
401: YPFHDQTSRV HSRPHVYHPF HDQTSPANVQ EEEGPSSIEV CVPTLDGRVI IEIVVESFFG EKVASLKEKI VKVIQIPSKY LKLRGKLVGV LRDDKSLADN
501: NVEAGEILIA TWRFSRWEVQ IT

Best Arabidopsis Sequence Match ( AT3G49130.1 )
(BLAST)

001: MVDLFDFVGG GNYSAAMPPP ERLSVMIMNR VAQTQPDMVL QLPLGSQLTI PAKGITLKEL GVMKLTAQSS VRYGFDFWCG LWKRVYMNPL FQFLNPSDSR
101: SDFYNGFTAA YSRVLKPSKK LKKFDACTAT VLEGFFHRLH LFKLEEGVET AMIDLHGFVY GVDCFAHMAD DNYSAIMDPP ERPSMMINQL TQIQRNAPAP
201: HEKCLKRSYN FPYAFGGGIS LKELDLMKKV VMKPQFKFME PTNSVFGLYN VVVDAYSRVV KPSDDAYASM GMMQTARPEE PEAKRQKFDE SALNPEGAVR
301: RRHSRWQ

Arabidopsis Description

SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SMU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.