Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G49130.1 | Thale cress | cytosol | 8.25 | 18.24 |
| AT5G12280.1 | Thale cress | cytosol | 11.05 | 17.9 |
| CDX71843 | Canola | cytosol | 5.3 | 16.51 |
| AT1G14640.1 | Thale cress | cytosol | 17.53 | 16.19 |
| AT1G14650.1 | Thale cress | cytosol | 17.82 | 15.41 |
| Solyc04g005690.2.1 | Tomato | cytosol, nucleus | 15.91 | 14.06 |
| KRH35776 | Soybean | cytosol | 16.49 | 13.98 |
| KRH12470 | Soybean | cytosol, endoplasmic reticulum, nucleus | 15.46 | 13.98 |
| GSMUA_Achr3P03970_001 | Banana | cytosol | 15.91 | 13.79 |
| PGSC0003DMT400007349 | Potato | cytosol | 16.2 | 13.7 |
| Solyc02g081960.2.1 | Tomato | cytosol, nucleus | 15.46 | 13.65 |
| KRH36511 | Soybean | cytosol | 16.05 | 13.52 |
| TraesCS3B01G212000.1 | Wheat | cytosol | 11.49 | 13.49 |
| AT3G27600.1 | Thale cress | cytosol | 6.19 | 13.42 |
| Zm00001d040343_P003 | Maize | cytosol | 15.91 | 13.38 |
| PGSC0003DMT400018892 | Potato | cytosol | 15.76 | 13.34 |
| KRG90981 | Soybean | nucleus | 15.61 | 13.28 |
| CDY69291 | Canola | cytosol, golgi | 3.24 | 13.25 |
| KXG32223 | Sorghum | nucleus, plastid | 3.68 | 13.09 |
| EES00535 | Sorghum | cytosol | 15.46 | 13.08 |
| Zm00001d008293_P001 | Maize | cytosol | 15.46 | 13.03 |
| VIT_01s0011g02040.t01 | Wine grape | cytosol | 15.61 | 13.02 |
| TraesCS3B01G211900.1 | Wheat | cytosol | 14.58 | 12.91 |
| TraesCS3D01G510100.1 | Wheat | cytosol | 15.02 | 12.85 |
| TraesCS3A01G503600.1 | Wheat | cytosol | 14.87 | 12.77 |
| GSMUA_Achr9P12650_001 | Banana | cytosol | 15.17 | 12.76 |
| Os02t0245000-01 | Rice | cytosol | 14.43 | 12.37 |
| HORVU3Hr1G110920.1 | Barley | cytosol | 14.87 | 12.33 |
| TraesCS3B01G566900.1 | Wheat | cytosol | 14.87 | 12.2 |
| AT5G06890.1 | Thale cress | cytosol | 1.18 | 12.12 |
| AT4G16200.1 | Thale cress | nucleus | 3.09 | 7.29 |
| AT1G18050.1 | Thale cress | nucleus | 2.36 | 7.14 |
Protein Annotations
| Gene3D:1.10.10.790 | MapMan:35.1 | EntrezGene:830540 | ProteinID:AED91028.1 | ArrayExpress:AT5G06520 | EnsemblPlantsGene:AT5G06520 |
| RefSeq:AT5G06520 | TAIR:AT5G06520 | RefSeq:AT5G06520-TAIR-G | EnsemblPlants:AT5G06520.1 | TAIR:AT5G06520.1 | Unigene:At.54748 |
| ProteinID:BAB11401.1 | GO:GO:0000381 | GO:GO:0000389 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005686 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0071004 | GO:GO:0071013 | InterPro:IPR000061 | InterPro:IPR035967 | RefSeq:NP_196270.1 | PFAM:PF01805 |
| PO:PO:0007611 | PO:PO:0009031 | PFscan:PS50128 | UniProt:Q9FG18 | SMART:SM00648 | SUPFAM:SSF109905 |
| InterPro:SWAP/Surp_sf | InterPro:Surp | UniParc:UPI00000A50FB | SEG:seg | : | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG18]
Coordinates
chr5:-:1987181..1989372
Molecular Weight (calculated)
76701.0 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.334
Length
679 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTSMHKDLR SRQNNSNQVG ADSESTRLVN IRNLAKIVND SRFRSLSPDT PATHDAQDYL WPPSLDMPLL APPVNFSHLP LGITFTRKEL ELIKLTAQFV
101: AVYGKYFQRE LTTRVVESPL FEFLKPTDSR NSFYTRIILG YQGVLMPSQK LKTKSEVFDG FSKLIAQVPV KDEDDVEMAM TDLHAYEYFA NMSINDLRAP
201: APVKFAFLTR GVTFTRNELD TIKLTAQFVA VYGTLFRTEL MKRVFISPKF DFFKSTDSKC SFYLRLVDGY SRVLRRSRKN GAGLGEVVVG FLKLLDQVVE
301: KKDAVEMALT DLHALEFFAN VDGGVLQPRP EQYHPMMPTV PPLIMPQLGS QFTQLQVPQP SCSPPVRMMS PPRPQNDLQS GQSNSNKAPA SVAPIEPPPE
401: IRSCVENTAL IVSKNGLEIE RKMMELSMND ARHRFVWSTD PYHAFYQLKL AEYRAQNQDR AHDIQPNVLR SFGFGFEFPE KEITLKELGI IKLTAQFMAR
501: YGMNFVQGLR KRVVGNPQFK FLESTNNSRF SFYNGLVIAY SRVLMPSKML SKSDDCTATV VDGFLSCLQL EKREEGVDID MIDLLDCFAR LEDADYSANV
601: PQPQHLSTQM QPPHTPETSP PLPLPLKNES SPVLADQHPD SSTIDDEWQV IDFTGQSLPD NVASLKDKTA GGIQIPANK
101: AVYGKYFQRE LTTRVVESPL FEFLKPTDSR NSFYTRIILG YQGVLMPSQK LKTKSEVFDG FSKLIAQVPV KDEDDVEMAM TDLHAYEYFA NMSINDLRAP
201: APVKFAFLTR GVTFTRNELD TIKLTAQFVA VYGTLFRTEL MKRVFISPKF DFFKSTDSKC SFYLRLVDGY SRVLRRSRKN GAGLGEVVVG FLKLLDQVVE
301: KKDAVEMALT DLHALEFFAN VDGGVLQPRP EQYHPMMPTV PPLIMPQLGS QFTQLQVPQP SCSPPVRMMS PPRPQNDLQS GQSNSNKAPA SVAPIEPPPE
401: IRSCVENTAL IVSKNGLEIE RKMMELSMND ARHRFVWSTD PYHAFYQLKL AEYRAQNQDR AHDIQPNVLR SFGFGFEFPE KEITLKELGI IKLTAQFMAR
501: YGMNFVQGLR KRVVGNPQFK FLESTNNSRF SFYNGLVIAY SRVLMPSKML SKSDDCTATV VDGFLSCLQL EKREEGVDID MIDLLDCFAR LEDADYSANV
601: PQPQHLSTQM QPPHTPETSP PLPLPLKNES SPVLADQHPD SSTIDDEWQV IDFTGQSLPD NVASLKDKTA GGIQIPANK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.