Factsheet for Bra031050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21696	Canola	cytosol	79.9	93.26
Bra032181.1-P	Field mustard	cytosol	14.57	26.85
Bra000608.1-P	Field mustard	cytosol	4.27	23.94
KXG32223	Sorghum	nucleus, plastid	6.53	13.61
Bra016688.1-P	Field mustard	cytosol	23.62	13.58
Bra023557.1-P	Field mustard	mitochondrion	8.04	13.45
GSMUA_Achr3P03970_001	Banana	cytosol	26.38	13.41
KRH12470	Soybean	cytosol, endoplasmic reticulum, nucleus	24.87	13.18
Solyc04g005690.2.1	Tomato	cytosol, nucleus	24.37	12.63
TraesCS3B01G211900.1	Wheat	cytosol	24.12	12.52
Solyc02g081960.2.1	Tomato	cytosol, nucleus	24.12	12.48
GSMUA_Achr9P12650_001	Banana	cytosol	25.13	12.39
VIT_01s0011g02040.t01	Wine grape	cytosol	25.13	12.29
KRG90981	Soybean	nucleus	24.62	12.28
Os02t0245000-01	Rice	cytosol	24.37	12.25
EES00535	Sorghum	cytosol	24.62	12.2
TraesCS3A01G503600.1	Wheat	cytosol	24.12	12.14
KRH35776	Soybean	cytosol	24.37	12.11
TraesCS3D01G510100.1	Wheat	cytosol	24.12	12.09
PGSC0003DMT400007349	Potato	cytosol	24.37	12.08
KRH36511	Soybean	cytosol	24.37	12.03
Zm00001d008293_P001	Maize	cytosol	24.37	12.03
Zm00001d040343_P003	Maize	cytosol	24.37	12.02
PGSC0003DMT400018892	Potato	cytosol	24.12	11.97
HORVU3Hr1G110920.1	Barley	cytosol	24.12	11.72
TraesCS3B01G566900.1	Wheat	cytosol	24.37	11.71
TraesCS3B01G212000.1	Wheat	cytosol	16.83	11.59
Bra007503.1-P	Field mustard	cytosol	14.32	10.9
Bra026198.1-P	Field mustard	cytosol, plastid	4.27	9.24

Protein Annotations

Gene3D:1.10.10.790	MapMan:35.1	EnsemblPlantsGene:Bra031050	EnsemblPlants:Bra031050.1	EnsemblPlants:Bra031050.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	InterPro:IPR000061	InterPro:IPR035967	UniProt:M4EQH9	PFAM:PF01805
PFscan:PS50128	SMART:SM00648	SUPFAM:SSF109905	InterPro:SWAP/Surp_sf	InterPro:Surp	UniParc:UPI0002542A61
SEG:seg	:	:	:	:	:

Description

AT5G06520 (E=3e-020) | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

Coordinates

chrA09:-:32742466..32743737

Molecular Weight (calculated)

45555.2 Da

IEP (calculated)

5.531

GRAVY (calculated)

-0.305

Length

398 amino acids

Sequence
(BLAST)

001: MLSSRQSGPI QAPEDPETRE IVERTAALVG THGLLMERRL LAVNVNDERY DFLRSRQDHP YYDFYRRKVV EHELTPDDEP SGDLLLFTCP PQGITRKEFG
101: ALKLTAQFVA RYGMSFWRDL IHCVTMNPNP LFEFVKTSDI NFSLLLRLVD AYEMALEPYK KSCLHRTNPK ETVLEGFFYL VQGEKHSEEV GVQLATIDLH
201: AFVSGLDFIA SREVGELLPP GVLSTQMRSG ALPPSDEDDD DDDDDATLEV HHPSPEEHHY YPFTYPQGIT PKQLGIIKLT AHFLVRYGWG FWVGLHKRVI
301: LKPHLPFGFL YSPDRSYHLL FNWLTNVYVG VMPAPGRLRL SPSAREIILD GFFYLLEDGS DIATSDLHAF VGGIDYFAKR ENYEKSALLP QHPSYTFR

Best Arabidopsis Sequence Match ( AT5G06520.1 )
(BLAST)

001: MYTSMHKDLR SRQNNSNQVG ADSESTRLVN IRNLAKIVND SRFRSLSPDT PATHDAQDYL WPPSLDMPLL APPVNFSHLP LGITFTRKEL ELIKLTAQFV
101: AVYGKYFQRE LTTRVVESPL FEFLKPTDSR NSFYTRIILG YQGVLMPSQK LKTKSEVFDG FSKLIAQVPV KDEDDVEMAM TDLHAYEYFA NMSINDLRAP
201: APVKFAFLTR GVTFTRNELD TIKLTAQFVA VYGTLFRTEL MKRVFISPKF DFFKSTDSKC SFYLRLVDGY SRVLRRSRKN GAGLGEVVVG FLKLLDQVVE
301: KKDAVEMALT DLHALEFFAN VDGGVLQPRP EQYHPMMPTV PPLIMPQLGS QFTQLQVPQP SCSPPVRMMS PPRPQNDLQS GQSNSNKAPA SVAPIEPPPE
401: IRSCVENTAL IVSKNGLEIE RKMMELSMND ARHRFVWSTD PYHAFYQLKL AEYRAQNQDR AHDIQPNVLR SFGFGFEFPE KEITLKELGI IKLTAQFMAR
501: YGMNFVQGLR KRVVGNPQFK FLESTNNSRF SFYNGLVIAY SRVLMPSKML SKSDDCTATV VDGFLSCLQL EKREEGVDID MIDLLDCFAR LEDADYSANV
601: PQPQHLSTQM QPPHTPETSP PLPLPLKNES SPVLADQHPD SSTIDDEWQV IDFTGQSLPD NVASLKDKTA GGIQIPANK

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.