Factsheet for Bra032181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38929	Canola	cytosol	53.24	68.05
CDX89545	Canola	cytosol	44.91	57.74
CDX89548	Canola	cytosol	44.44	57.14
Bra000608.1-P	Field mustard	cytosol	8.33	25.35
Bra031050.1-P	Field mustard	cytosol	26.85	14.57
KXG32223	Sorghum	nucleus, plastid	10.65	12.04
Bra023557.1-P	Field mustard	mitochondrion	12.96	11.76
Bra016688.1-P	Field mustard	cytosol	32.87	10.26
Solyc02g081960.2.1	Tomato	cytosol, nucleus	34.72	9.75
AT1G14650.1	Thale cress	cytosol	35.19	9.68
Solyc04g005690.2.1	Tomato	cytosol, nucleus	33.8	9.51
PGSC0003DMT400007349	Potato	cytosol	33.8	9.09
PGSC0003DMT400018892	Potato	cytosol	33.33	8.98
Os02t0245000-01	Rice	cytosol	32.87	8.96
VIT_01s0011g02040.t01	Wine grape	cytosol	33.33	8.85
TraesCS3B01G211900.1	Wheat	cytosol	31.02	8.74
TraesCS3A01G503600.1	Wheat	cytosol	31.94	8.72
TraesCS3D01G510100.1	Wheat	cytosol	31.94	8.69
KRG90981	Soybean	nucleus	31.94	8.65
EES00535	Sorghum	cytosol	31.94	8.59
KRH36511	Soybean	cytosol	31.94	8.56
Zm00001d008293_P001	Maize	cytosol	31.94	8.56
HORVU3Hr1G110920.1	Barley	cytosol	32.41	8.55
KRH35776	Soybean	cytosol	31.48	8.49
Zm00001d040343_P003	Maize	cytosol	31.48	8.43
KRH12470	Soybean	cytosol, endoplasmic reticulum, nucleus	29.17	8.39
TraesCS3B01G566900.1	Wheat	cytosol	31.94	8.33
GSMUA_Achr3P03970_001	Banana	cytosol	30.09	8.3
GSMUA_Achr9P12650_001	Banana	cytosol	30.56	8.18
Bra007503.1-P	Field mustard	cytosol	17.13	7.07
TraesCS3B01G212000.1	Wheat	cytosol	18.52	6.92
Bra026198.1-P	Field mustard	cytosol, plastid	2.78	3.26

Protein Annotations

Gene3D:1.10.10.790	MapMan:35.2	EnsemblPlantsGene:Bra032181	EnsemblPlants:Bra032181.1	EnsemblPlants:Bra032181.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	InterPro:IPR000061	InterPro:IPR035967	UniProt:M4ETP9	PFAM:PF01805
PFscan:PS50128	PANTHER:PTHR15316	PANTHER:PTHR15316:SF1	SMART:SM00648	SUPFAM:SSF109905	InterPro:SWAP/Surp_sf
InterPro:Surp	UniParc:UPI00025445C9	:	:	:	:

Description

AT5G06520 (E=4e-017) | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

Coordinates

chrA04:+:10260398..10261048

Molecular Weight (calculated)

24969.6 Da

IEP (calculated)

6.090

GRAVY (calculated)

-0.561

Length

216 amino acids

Sequence
(BLAST)

001: MERRIRNSNF RNAKFNFLNN SDPCRAFYQQ RLTEYREASP NQEPYAPVAV TTDHPECKGP PSSFTFELEP PHWITLKEHA TLKLTAQSVA RYGMSFLEAL
101: INKYSTNPHL GFIKFNDPRC YYFIQLVYAY SRVLRLSKTD GASTETFVKG FLEQLQILLE KDEEEGLEMA MSDLDAVVGC SDHMEDQESF AKMPLPDHLL
201: MGILQLQHHQ GEPKRQ

Best Arabidopsis Sequence Match ( AT5G06520.1 )
(BLAST)

001: MYTSMHKDLR SRQNNSNQVG ADSESTRLVN IRNLAKIVND SRFRSLSPDT PATHDAQDYL WPPSLDMPLL APPVNFSHLP LGITFTRKEL ELIKLTAQFV
101: AVYGKYFQRE LTTRVVESPL FEFLKPTDSR NSFYTRIILG YQGVLMPSQK LKTKSEVFDG FSKLIAQVPV KDEDDVEMAM TDLHAYEYFA NMSINDLRAP
201: APVKFAFLTR GVTFTRNELD TIKLTAQFVA VYGTLFRTEL MKRVFISPKF DFFKSTDSKC SFYLRLVDGY SRVLRRSRKN GAGLGEVVVG FLKLLDQVVE
301: KKDAVEMALT DLHALEFFAN VDGGVLQPRP EQYHPMMPTV PPLIMPQLGS QFTQLQVPQP SCSPPVRMMS PPRPQNDLQS GQSNSNKAPA SVAPIEPPPE
401: IRSCVENTAL IVSKNGLEIE RKMMELSMND ARHRFVWSTD PYHAFYQLKL AEYRAQNQDR AHDIQPNVLR SFGFGFEFPE KEITLKELGI IKLTAQFMAR
501: YGMNFVQGLR KRVVGNPQFK FLESTNNSRF SFYNGLVIAY SRVLMPSKML SKSDDCTATV VDGFLSCLQL EKREEGVDID MIDLLDCFAR LEDADYSANV
601: PQPQHLSTQM QPPHTPETSP PLPLPLKNES SPVLADQHPD SSTIDDEWQV IDFTGQSLPD NVASLKDKTA GGIQIPANK

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.