CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24096	Soybean	plastid	91.96	85.31
VIT_06s0061g00080.t01	Wine grape	plastid	75.63	71.33
AT1G50450.1	Thale cress	mitochondrion	69.6	64.72
CDY22796	Canola	mitochondrion	68.84	64.62
CDY37136	Canola	mitochondrion	68.34	64.15
Solyc11g065240.1.1	Tomato	plastid	68.84	63.72
Zm00001d004978_P001	Maize	plastid	58.04	63.46
PGSC0003DMT400088617	Potato	mitochondrion	68.34	63.26
GSMUA_Achr11P...	Banana	plastid	65.58	62.29
EES09230	Sorghum	plastid	64.32	60.24
Os12t0137200-01	Rice	plastid	64.57	60.19
TraesCS5B01G135000.2	Wheat	plastid	63.57	59.81
TraesCS5D01G142600.1	Wheat	plastid	63.57	59.81
TraesCS5A01G136000.1	Wheat	plastid	63.32	59.57
Os11t0140700-02	Rice	cytosol, peroxisome	20.6	56.16
HORVU5Hr1G043550.6	Barley	mitochondrion	63.57	55.24
TraesCS5A01G135800.1	Wheat	mitochondrion	54.02	54.57
TraesCS5D01G142300.1	Wheat	mitochondrion	54.27	54.55
TraesCS5B01G134600.2	Wheat	mitochondrion	53.02	53.28
KXG28657	Sorghum	plastid	14.82	46.83
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	67.34	45.42
OQU79120	Sorghum	extracellular	22.86	28.35

Protein Annotations

EMBL:ACUP02006778	EnsemblPlants:KRH29070	EnsemblPlantsGene:GLYMA_11G095400	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
InterPro:Sacchrp_dh_NADP	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1	PFAM:PF03435	ProteinID:KRH29070	ProteinID:KRH29070.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI00023CC78C	UniProt:I1LIL8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr11:-:7236082..7240527

Molecular Weight (calculated)

42728.5 Da

IEP (calculated)

7.338

GRAVY (calculated)

0.009

Length

398 amino acids

Sequence
(BLAST)

001: MAPLSLPLNL KWTPSNVKAT APATTTGKVP EVPLPEKIRN SRILVLGGTG RVGGSTATAL SNLCPDLQIL VAGRNREKGE ALTAKLGGNS EFACVDIDDV
101: NSLETALKSV DLVVHAAGPF QQAERCSVLE AAINTKTAYL DVCDDTSYAW RAKSLMNMAL DANVPAITTG GIYPGVSNVM AAELVRAASE SEDKPERLRF
201: YYYTAGTGGA GPTILATSFM LLGEEVVAYN KGEKIRMRPY SGMLNVDFGK GIGKRDVYLL NLPEVSSAHK ILGVPSVSAR FGTSPFFWNW GMEAMTKLLP
301: SEFLRDRNKV QSLVQLFDPA VRAMDGISGE RVSMRVDLEC ASGRNTVGIF SHRRLSVSVG IATAAFALAI LEGSTQPGVW FPEEVCVEYK CEVKSHIG

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.