Factsheet for HORVU5Hr1G043550.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G142600.1	Wheat	plastid	89.52	96.93
TraesCS5B01G135000.2	Wheat	plastid	89.08	96.45
TraesCS5A01G136000.1	Wheat	plastid	87.55	94.8
Os12t0137200-01	Rice	plastid	76.86	82.44
EES09230	Sorghum	plastid	74.89	80.71
Zm00001d004978_P001	Maize	plastid	61.79	77.75
GSMUA_Achr11P...	Banana	plastid	67.03	73.27
VIT_06s0061g00080.t01	Wine grape	plastid	65.5	71.09
Os11t0140700-02	Rice	cytosol, peroxisome	22.27	69.86
AT1G50450.1	Thale cress	mitochondrion	63.1	67.52
CDY37136	Canola	mitochondrion	62.23	67.22
CDY22796	Canola	mitochondrion	62.23	67.22
KRH24096	Soybean	plastid	60.92	65.03
KRH29070	Soybean	plastid	55.24	63.57
PGSC0003DMT400088617	Potato	mitochondrion	58.95	62.79
Solyc11g065240.1.1	Tomato	plastid	58.73	62.56
KXG28657	Sorghum	plastid	16.16	58.73
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	61.35	47.63
OQU79120	Sorghum	extracellular	22.93	32.71

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	UniProt:A0A287QZN7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G043550
EnsemblPlants:HORVU5Hr1G043550.6	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03435	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1	SUPFAM:SSF51735
InterPro:Sacchrp_dh_NADP	UniParc:UPI000B486D17	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:336588256..336594147

Molecular Weight (calculated)

49744.8 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.113

Length

458 amino acids

Sequence
(BLAST)

001: TASTHPRLYP PSRPPFPRWH GWLRPPRVTQ VQCSSMAAMV RACMPLRTPP AAASSTATVP AAPIKPRSSA RVLVLGGTGR VGGSTATALS KLSPDLNILI
101: GGRNREKGES LASKLGEQSE FVEIDTGNAA MLEKALEDVD LVVHTAGPFQ REAECTVLRA AISTKTAYID VCDDMDYSWR AKAFHEEAKA QGVPAITTAG
201: IYPGVSNVMA AELVDAARSE DGEPERLRFF YYTAGSGGAG PTILATSFLL LGEDVIAYNK GEEIKLKPYS GVLNIDFGKG VRKRDVYLLN LPEVKSAHKF
301: LGVPTVSARF GTAPFFWNWG MEAFANFLPV ELLRDKDKVR KLVEKIDPLV RAIDGIVGER VSMRVDLECS NGRNTIGLFS HRKLSVSVGH STAAFVQAVL
401: EGSTQPGVWF PEEPEGIAIE SRKLLLERAS QGTTNFVMNK PSWMIETDPK EVILGIYV

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.