Factsheet for Bra018849.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
peroxisome 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22796	Canola	mitochondrion	68.64	95.52
CDY37136	Canola	mitochondrion	67.29	93.63
AT1G50450.1	Thale cress	mitochondrion	62.03	85.51
VIT_06s0061g00080.t01	Wine grape	plastid	51.19	71.56
KRH24096	Soybean	plastid	50.0	68.76
KRH29070	Soybean	plastid	45.42	67.34
Solyc11g065240.1.1	Tomato	plastid	48.81	66.98
TraesCS5D01G142600.1	Wheat	plastid	47.97	66.9
TraesCS5A01G136000.1	Wheat	plastid	47.97	66.9
TraesCS5B01G135000.2	Wheat	plastid	47.8	66.67
GSMUA_Achr11P...	Banana	plastid	47.12	66.35
PGSC0003DMT400088617	Potato	mitochondrion	48.31	66.28
EES09230	Sorghum	plastid	46.61	64.71
Os12t0137200-01	Rice	plastid	46.44	64.17
Zm00001d004978_P001	Maize	plastid	38.14	61.81
HORVU5Hr1G043550.6	Barley	mitochondrion	47.63	61.35
Os11t0140700-02	Rice	cytosol, peroxisome	14.58	58.9
TraesCS5A01G135800.1	Wheat	mitochondrion	38.31	57.36
TraesCS5D01G142300.1	Wheat	mitochondrion	38.14	56.82
TraesCS5B01G134600.2	Wheat	mitochondrion	37.12	55.3
KXG28657	Sorghum	plastid	10.17	47.62
OQU79120	Sorghum	extracellular	15.42	28.35

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	EnsemblPlantsGene:Bra018849	EnsemblPlants:Bra018849.1	EnsemblPlants:Bra018849.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0016491
GO:GO:0055114	UniProt:M4DQQ6	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03435	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1
SUPFAM:SSF51735	InterPro:Sacchrp_dh_NADP	UniParc:UPI000253EAF0	SEG:seg	:	:

Description

AT1G50450 (E=7e-097) | binding / catalytic

Coordinates

chrA06:+:1617360..1621196

Molecular Weight (calculated)

64455.0 Da

IEP (calculated)

9.631

GRAVY (calculated)

-0.511

Length

590 amino acids

Sequence
(BLAST)

001: MGKLKDHEAQ TKPGHQRPEG KEMDQLDLIH ALEPKRGRDT NPLVKPPQNF AGRKVINGGS NRHVPPETHR KQEPGIRDTT NDERNLAQHR QNRSSPEALK
101: PPETKRPAET TGGEGGSPES KAGDHILRKD EPQSQKPHNP SLERQTDVGD DPDGREADRR TRTGIKRRHR LSSQSPPCEK ATTVRASSSN ETKYDGVAPE
201: VKLADPTRNY RVLVLGGTGR VGGSTAVALS KLCPKLKIVV AGRNREKGEA MVAKLGENSE FCKVDINDAN MLQTSLKDVD LVVHAAGPFQ QAPKCTVLEA
301: AIKTKTAYID VCDDTSYAFR AKSLQAEALA ANVPAITTAG IYPGVSNVMA AEMVAAARSE DKGKPEKLRF SYYTAGTGGA GPTILATSFL LLGEKVKLKP
401: YSGMINVDFG KGIRKRDVYL LNLPEVRSTH EVLGVPTVSA RFGTSPFFWN WGMEIMTKLL PQEVLRDRTK VQQMVDLFDP VVRATDSFSG ERVSMRVDLE
501: CSDGRVAVGL YSHKKLSVAV GVSTAAFVVA MLEGSTQPGV WFPEEPQGIA VEAREALLRR ASQGTFNFIL NKPPWMVETV PKEVILGIYV

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.