Factsheet for Os12t0137200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0140700-02	Rice	cytosol, peroxisome	29.51	86.3
EES09230	Sorghum	plastid	84.07	84.47
Zm00001d004978_P001	Maize	plastid	68.38	80.22
HORVU5Hr1G043550.6	Barley	mitochondrion	82.44	76.86
GSMUA_Achr11P...	Banana	plastid	70.96	72.31
TraesCS5A01G135800.1	Wheat	mitochondrion	66.04	71.57
TraesCS5D01G142300.1	Wheat	mitochondrion	66.04	71.21
TraesCS5B01G134600.2	Wheat	mitochondrion	64.64	69.7
VIT_06s0061g00080.t01	Wine grape	plastid	68.62	69.43
AT1G50450.1	Thale cress	mitochondrion	67.45	67.29
KXG28657	Sorghum	plastid	19.67	66.67
KRH24096	Soybean	plastid	66.28	65.97
PGSC0003DMT400088617	Potato	mitochondrion	65.81	65.35
CDY37136	Canola	mitochondrion	64.87	65.33
CDY22796	Canola	mitochondrion	64.87	65.33
Solyc11g065240.1.1	Tomato	plastid	65.57	65.12
KRH29070	Soybean	plastid	60.19	64.57
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	64.17	46.44
OQU79120	Sorghum	extracellular	24.59	32.71

Protein Annotations

EnsemblPlants:Os12t0137200-01	EnsemblPlantsGene:Os12g0137200	EntrezGene:4351451	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:Sacchrp_dh_NADP
PANTHER:PTHR43796	PANTHER:PTHR43796:SF1	PFAM:PF03435	ProteinID:BAT15806.1	RefSeq:XP_015620193.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0001C7A4C6	UniProt:A0A0P0Y6T5	MapMan:35.2	:	:

Description

Similar to Saccharopine dehydrogenase family protein, expressed. (Os12t0137200-01)

Coordinates

chr12:+:1802714..1807513

Molecular Weight (calculated)

46008.1 Da

IEP (calculated)

6.185

GRAVY (calculated)

-0.003

Length

427 amino acids

Sequence
(BLAST)

001: MATVVRACMP LPPAAVASSS AAPSTDAQAQ RSPSSSSARV LVLGGTGRVG GSTATALSKL RPDLNILIAG RNREKGESLA SKLGEESEFV QVDIRDRNML
101: EEVLQDVDLV VHAAGPFQRE NECTVLQAAI ATKTAYIDVC DDTDYSWRAK GFHEQAKDCG IPAITTAGIY PGVSNVMAAE LVHAARSENA GEPERLRFFY
201: YTAGTGGAGP TILTTSFLLL AEDVIAYNKG EEIKLKPYSG ALSIDFGKGV RKKDVYLLNL PEVKSAYKVL GVPTVSARFG TAPFFWNWGM QAFANFLPVE
301: FLRDRNKVLK LVGFVDPFVR AIDGIAGERV SMRVDLDCSN GKNTIGLFSH RKLSVSVGYA TAAFVLAVLE GSTQPGVWFP EEPEGVAIES RKVLLERASQ
401: GTTIFVMNKP SWMIETDPKE VGLGIYV

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.