CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28657	Sorghum	plastid	19.31	49.21
Os11t0140700-02	Rice	cytosol, peroxisome	19.63	43.15
Zm00001d004978_P001	Maize	plastid	37.07	32.69
EES09230	Sorghum	plastid	37.69	28.47
Os12t0137200-01	Rice	plastid	32.71	24.59
HORVU5Hr1G043550.6	Barley	mitochondrion	32.71	22.93
KRH29070	Soybean	plastid	28.35	22.86
TraesCS5D01G142300.1	Wheat	mitochondrion	28.04	22.73
AT1G50450.1	Thale cress	mitochondrion	29.91	22.43
TraesCS5A01G135800.1	Wheat	mitochondrion	27.41	22.34
GSMUA_Achr11P...	Banana	plastid	27.73	21.24
CDY22796	Canola	mitochondrion	28.04	21.23
TraesCS5B01G134600.2	Wheat	mitochondrion	26.17	21.21
CDY37136	Canola	mitochondrion	27.73	20.99
VIT_06s0061g00080.t01	Wine grape	plastid	27.41	20.85
KRH24096	Soybean	plastid	27.41	20.51
Solyc11g065240.1.1	Tomato	plastid	24.3	18.14
PGSC0003DMT400088617	Potato	mitochondrion	23.68	17.67
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	28.35	15.42

Protein Annotations

EnsemblPlants:OQU79120	EnsemblPlantsGene:SORBI_3008G098230	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1
ProteinID:OQU79120	ProteinID:OQU79120.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B8B9694	UniProt:A0A1Z5R5X4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:46688310..46690035

Molecular Weight (calculated)

34410.8 Da

IEP (calculated)

7.441

GRAVY (calculated)

-0.270

Length

321 amino acids

Sequence
(BLAST)

001: MRSGSPPALA GGRACLLFAL DGGMAPRWDL DVGARISVEV PPQGWSERSV PSRAAVAHAV MHPLHLASGV QIHGDGALTC WGGAAPTCCC KLRIRDWRHG
101: HRRQSVCDSS SRRGSSLRLQ GGCLGPAEEQ DLEDRPRGTG RVGGSTTTAL SQLRPDLGIL VGGTNRQSEF VQVDTRDAGM LEEALQGVDL VVHTADPFQR
201: AEEYTVLQTA ISTKTPYIDV CDHEQAKVAG VPAITTAGIY SGVSNDFRTQ FSLTFPMAIT PSDLVKAALI RWPTCRCEPL YPIPETSMRK ADKSSDPSVL
301: HSDILLHNNC NQKRSSGSAC S

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.