CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0140700-02	Rice	cytosol, peroxisome	47.62	41.1
Zm00001d004978_P001	Maize	plastid	76.19	26.37
EES09230	Sorghum	plastid	88.1	26.12
Os12t0137200-01	Rice	plastid	66.67	19.67
OQU79120	Sorghum	extracellular	49.21	19.31
HORVU5Hr1G043550.6	Barley	mitochondrion	58.73	16.16
TraesCS5A01G135800.1	Wheat	mitochondrion	49.21	15.74
AT1G50450.1	Thale cress	mitochondrion	51.59	15.19
TraesCS5D01G142300.1	Wheat	mitochondrion	47.62	15.15
KRH29070	Soybean	plastid	46.83	14.82
CDY37136	Canola	mitochondrion	49.21	14.62
CDY22796	Canola	mitochondrion	48.41	14.39
TraesCS5B01G134600.2	Wheat	mitochondrion	44.44	14.14
GSMUA_Achr11P...	Banana	plastid	46.83	14.08
KRH24096	Soybean	plastid	46.03	13.52
VIT_06s0061g00080.t01	Wine grape	plastid	43.65	13.03
PGSC0003DMT400088617	Potato	mitochondrion	36.51	10.7
Solyc11g065240.1.1	Tomato	plastid	35.71	10.47
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	47.62	10.17

Protein Annotations

EnsemblPlants:KXG28657	EnsemblPlantsGene:SORBI_3005G149000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:Sacchrp_dh_NADP	PANTHER:PTHR43796
PANTHER:PTHR43796:SF1	PFAM:PF03435	ProteinID:KXG28657	ProteinID:KXG28657.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI00081ADF57	UniProt:A0A1B6PSL1	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:61740897..61747039

Molecular Weight (calculated)

13441.9 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.287

Length

126 amino acids

Sequence
(BLAST)

001: MGIVVRACVP PAPATAAPSG SREATQAQWR SKTSRTAHVL VLGSTGRKGE SVAAKLGSRS EFVQVDTRDT GMLEEALQGV DLVVHTAGPF QRAEECTVLQ
101: AAISTKTPYI DVCDDTDYSL RSRRPP

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.