Factsheet for TraesCS5B01G134600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G142300.1	Wheat	mitochondrion	96.46	96.46
TraesCS5A01G135800.1	Wheat	mitochondrion	93.94	94.42
Os12t0137200-01	Rice	plastid	69.7	64.64
TraesCS5B01G135000.2	Wheat	plastid	68.94	64.54
EES09230	Sorghum	plastid	67.93	63.29
Zm00001d004978_P001	Maize	plastid	56.57	61.54
GSMUA_Achr11P...	Banana	plastid	63.64	60.14
Os11t0140700-02	Rice	cytosol, peroxisome	21.72	58.9
VIT_06s0061g00080.t01	Wine grape	plastid	61.11	57.35
AT1G50450.1	Thale cress	mitochondrion	58.59	54.21
PGSC0003DMT400088617	Potato	mitochondrion	58.08	53.49
Solyc11g065240.1.1	Tomato	plastid	58.08	53.49
KRH29070	Soybean	plastid	53.28	53.02
KRH24096	Soybean	plastid	57.07	52.68
CDY22796	Canola	mitochondrion	55.81	52.12
CDY37136	Canola	mitochondrion	55.3	51.65
KXG28657	Sorghum	plastid	14.14	44.44
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	55.3	37.12
OQU79120	Sorghum	extracellular	21.21	26.17

Protein Annotations

EnsemblPlants:TraesCS5B01G134600.2	EnsemblPlantsGene:TraesCS5B01G134600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:Sacchrp_dh_NADP	PANTHER:PTHR43796
PANTHER:PTHR43796:SF1	PFAM:PF03435	SEG:seg	SUPFAM:SSF51735	MapMan:35.2	:

Description

No Description!

Coordinates

chr5B:-:251906036..251919445

Molecular Weight (calculated)

42601.3 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.019

Length

396 amino acids

Sequence
(BLAST)

001: MEMVKACMRP AASASSRPRV LVLGGTGRVG GSTATALSQF RLDLNILIGG RNREKGVLLV SKLGQRSEFV HVDIHNSSRL KEVLEGVDLV IHAAGPFQRD
101: DKCTVLQAAV FTKTGYTDIC HGVDYSWRAK SFHEQAKASG VPALITAGIS PGVSNVMAAE LVRTAKGESG GEPETLRFFY YIAGTGGAGP TTLGTSLLLL
201: GEDVIAYDKG SEIKLKAYSG ARNIDFGKGI GKKYVYLMNL PEVKSTHKNL GLPTVHAQFG SDPFIWNWGM ETFANFLPSD LLRDKNVTLK FAECVDPFIR
301: VIDGIVGERV AMRIDLESSN GHTTTGLFAH NNLSVSVGYA AAAFALAVLE GSTKPGVWFP EEPEGIAIDA RKLLLRRASR GVTNFTMNKN SGMIEC

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.