CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29070	Soybean	plastid	85.31	91.96
VIT_06s0061g00080.t01	Wine grape	plastid	77.62	78.91
AT1G50450.1	Thale cress	mitochondrion	71.79	71.96
PGSC0003DMT400088617	Potato	mitochondrion	71.33	71.16
Solyc11g065240.1.1	Tomato	plastid	71.33	71.16
CDY22796	Canola	mitochondrion	70.16	70.99
CDY37136	Canola	mitochondrion	69.7	70.52
GSMUA_Achr11P...	Banana	plastid	67.83	69.45
EES09230	Sorghum	plastid	66.67	67.29
Os12t0137200-01	Rice	plastid	65.97	66.28
TraesCS5D01G142600.1	Wheat	plastid	65.03	65.96
TraesCS5B01G135000.2	Wheat	plastid	65.03	65.96
TraesCS5A01G136000.1	Wheat	plastid	64.8	65.72
Zm00001d004978_P001	Maize	plastid	54.08	63.74
HORVU5Hr1G043550.6	Barley	mitochondrion	65.03	60.92
TraesCS5A01G135800.1	Wheat	mitochondrion	53.61	58.38
TraesCS5D01G142300.1	Wheat	mitochondrion	53.85	58.33
TraesCS5B01G134600.2	Wheat	mitochondrion	52.68	57.07
Os11t0140700-02	Rice	cytosol, peroxisome	18.88	55.48
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	68.76	50.0
KXG28657	Sorghum	plastid	13.52	46.03
OQU79120	Sorghum	extracellular	20.51	27.41

Protein Annotations

EntrezGene:100781532	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:35.2	EMBL:ACUP02007170	EnsemblPlantsGene:GLYMA_12G021500
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
UniProt:I1LPD1	EnsemblPlants:KRH24096	ProteinID:KRH24096	ProteinID:KRH24096.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03435
PANTHER:PTHR43796	PANTHER:PTHR43796:SF1	SUPFAM:SSF51735	InterPro:Sacchrp_dh_NADP	UniParc:UPI000233C5AD	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:1547281..1552018

Molecular Weight (calculated)

46459.0 Da

IEP (calculated)

7.383

GRAVY (calculated)

0.012

Length

429 amino acids

Sequence
(BLAST)

001: MAPLSLPLNL KWTPLSVKAT ATATTTSKVP EVPLPEKIRN SRILVLGGTG RVGGSTAIAL SNLCPDLQIL VAGRNREKGE VLTAKLGGNS EFARVDIDDV
101: NSLETALKNV DLVVHAAGPF QQAERCSVLE AAINTQTAYL DVCDDTSYAW RAKSFMNRAL DANVPAITTG GIYPGISNVM AAELVRAANE SEDKPERLRF
201: YYYTAGTGGA GPTILATSFL LLGEEVVAYN KGEKIRMRPY SGMLNVDFGK GIGKRDVYLL NLPEVSSAHE ILGVPSVSAR FGTAPFFWNW GMEAMTKLLP
301: SEFLRDRNKV QSLVQLFDPV VRAVDGIAGE RVSMRVDLEC ASGRNTVGIF SHRRLSVSVG IATAAFALAI LEGSTQPGVW FPEEAQGIPI EAREVLLKRA
401: SQGTFNFIMN RSPWMVETNP KEFGLGIYL

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.