Factsheet for GSMUA_Achr11P20170_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00080.t01	Wine grape	plastid	74.7	74.17
TraesCS5A01G136000.1	Wheat	plastid	73.27	72.58
TraesCS5D01G142600.1	Wheat	plastid	73.03	72.34
TraesCS5B01G135000.2	Wheat	plastid	72.79	72.1
EES09230	Sorghum	plastid	72.79	71.76
Os12t0137200-01	Rice	plastid	72.31	70.96
PGSC0003DMT400088617	Potato	mitochondrion	70.41	68.6
Solyc11g065240.1.1	Tomato	plastid	70.17	68.37
KRH24096	Soybean	plastid	69.45	67.83
AT1G50450.1	Thale cress	mitochondrion	68.74	67.29
Zm00001d004978_P001	Maize	plastid	58.23	67.03
HORVU5Hr1G043550.6	Barley	mitochondrion	73.27	67.03
TraesCS5A01G135800.1	Wheat	mitochondrion	62.05	65.99
CDY22796	Canola	mitochondrion	66.59	65.8
KRH29070	Soybean	plastid	62.29	65.58
CDY37136	Canola	mitochondrion	66.11	65.33
TraesCS5D01G142300.1	Wheat	mitochondrion	61.34	64.9
TraesCS5B01G134600.2	Wheat	mitochondrion	60.14	63.64
Os11t0140700-02	Rice	cytosol, peroxisome	21.24	60.96
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	66.35	47.12
KXG28657	Sorghum	plastid	14.08	46.83
OQU79120	Sorghum	extracellular	21.24	27.73

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009579	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G20170_001	EnsemblPlants:GSMUA_Achr11P20170_001
EnsemblPlants:GSMUA_Achr11T20170_001	UniProt:M0RTU7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03435	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1
SUPFAM:SSF51735	InterPro:Sacchrp_dh_NADP	UniParc:UPI000294BA9A	:	:	:

Description

astaxanthin synthase KC28, putative [Source:GMGC_GENE;Acc:GSMUA_Achr11G20170_001]

Coordinates

chr11:+:21150856..21159605

Molecular Weight (calculated)

44818.9 Da

IEP (calculated)

6.412

GRAVY (calculated)

0.032

Length

419 amino acids

Sequence
(BLAST)

001: MARAALHISM AISPTKCGEN GDKSAENSRV LILGGTGRVG GSTATALSKL CPSLQLLIAG RNREKGAALV SKLGKNAEFV EVNIESTNML EKTLEDVDLV
101: VHAAGPFQKA ENCGVLEAAI STKTAYVDIC DDTDYSQRAK SFHSEAVAAG VPAITTGGIY PGVSNVMAAE LVHSAKSENA GEPERLRFFY YTAGSGGAGP
201: TILATSFLLL GEDVIAYNKG EMIKMKPYSG VLNIDFGKGI GKRDVYLLNL PEVRSTHEIL GVPNVSARFG TAPFFWNWGM QAIANFVPRE ILRDRSKVQQ
301: LVQIFDPSVR AIDGIAGERV AIRVDLECSN GRSTVGLFTH KKLSVSVGYS TAAFALAVLE GSTQHGVWFP EEPEGIAIDA RKVLLERAIA AEGTINFVMN
401: KPPWLVETDP KELGLGIYV

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.