Factsheet for TraesCS5D01G142300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G135800.1	Wheat	mitochondrion	96.72	97.21
TraesCS5B01G134600.2	Wheat	mitochondrion	96.46	96.46
TraesCS5D01G142600.1	Wheat	plastid	70.71	66.19
Os12t0137200-01	Rice	plastid	71.21	66.04
EES09230	Sorghum	plastid	69.44	64.71
Zm00001d004978_P001	Maize	plastid	58.08	63.19
GSMUA_Achr11P...	Banana	plastid	64.9	61.34
Os11t0140700-02	Rice	cytosol, peroxisome	22.22	60.27
VIT_06s0061g00080.t01	Wine grape	plastid	61.87	58.06
AT1G50450.1	Thale cress	mitochondrion	60.1	55.61
PGSC0003DMT400088617	Potato	mitochondrion	59.34	54.65
Solyc11g065240.1.1	Tomato	plastid	59.34	54.65
KRH29070	Soybean	plastid	54.55	54.27
KRH24096	Soybean	plastid	58.33	53.85
CDY22796	Canola	mitochondrion	57.07	53.3
CDY37136	Canola	mitochondrion	56.57	52.83
KXG28657	Sorghum	plastid	15.15	47.62
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	56.82	38.14
OQU79120	Sorghum	extracellular	22.73	28.04

Protein Annotations

EnsemblPlants:TraesCS5D01G142300.1	EnsemblPlantsGene:TraesCS5D01G142300	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:Sacchrp_dh_NADP	PANTHER:PTHR43796
PANTHER:PTHR43796:SF1	PFAM:PF03435	SEG:seg	SUPFAM:SSF51735	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:-:228249245..228263435

Molecular Weight (calculated)

42605.4 Da

IEP (calculated)

8.897

GRAVY (calculated)

-0.057

Length

396 amino acids

Sequence
(BLAST)

001: MEMVRACMRP AASASSGPRV LVLGGTGRVG GSTATALSQL RPDLNILIGG RNREKGMPLV SKLGQRSEFI HVDIRNSSRL KEVLEGVDLV VHAAGPFQRD
101: DKCTVLQAAT FTKTRYTDIC DGVDYSWRAK SFHEQAKASG VPALITAGIS PGVSNVMAAE LVRTAKGESG GEPETLRFFY YIAGTGGAGP TTLGTSLLLL
201: GEDVIAYDKG SEIKLKPYSG ARNIDFGKGI GKKYVYLMNL PEVKSTHKNL GLPTVHALFG SDPFIWNWGM ETFANFLPSD LLRDKNVTLK FAECVDPFIR
301: VIDGIVGERV AMRIDLESSN GHTTTGLFAH NNLSVSVGYA AAAFALAVLE GSTKPGVWFP EEPEGIAIDA RKLLLRRASR GVTNFTMNKN SGMIEC

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.