Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22796 | Canola | mitochondrion | 86.45 | 87.26 |
| CDY37136 | Canola | mitochondrion | 85.51 | 86.32 |
| VIT_06s0061g00080.t01 | Wine grape | plastid | 73.36 | 74.41 |
| KRH24096 | Soybean | plastid | 71.96 | 71.79 |
| KRH29070 | Soybean | plastid | 64.72 | 69.6 |
| TraesCS5D01G142600.1 | Wheat | plastid | 68.69 | 69.5 |
| GSMUA_Achr11P... | Banana | plastid | 67.29 | 68.74 |
| Solyc11g065240.1.1 | Tomato | plastid | 68.93 | 68.6 |
| TraesCS5B01G135000.2 | Wheat | plastid | 67.52 | 68.32 |
| TraesCS5A01G136000.1 | Wheat | plastid | 67.52 | 68.32 |
| EES09230 | Sorghum | plastid | 67.52 | 68.0 |
| PGSC0003DMT400088617 | Potato | mitochondrion | 68.22 | 67.91 |
| Os12t0137200-01 | Rice | plastid | 67.29 | 67.45 |
| Zm00001d004978_P001 | Maize | plastid | 54.91 | 64.56 |
| HORVU5Hr1G043550.6 | Barley | mitochondrion | 67.52 | 63.1 |
| Bra018849.1-P | Field mustard | cytosol, nucleus, peroxisome | 85.51 | 62.03 |
| TraesCS5A01G135800.1 | Wheat | mitochondrion | 55.61 | 60.41 |
| TraesCS5D01G142300.1 | Wheat | mitochondrion | 55.61 | 60.1 |
| Os11t0140700-02 | Rice | cytosol, peroxisome | 20.33 | 59.59 |
| TraesCS5B01G134600.2 | Wheat | mitochondrion | 54.21 | 58.59 |
| KXG28657 | Sorghum | plastid | 15.19 | 51.59 |
| OQU79120 | Sorghum | extracellular | 22.43 | 29.91 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.2 | EntrezGene:841467 | UniProt:A0A178W6N9 | ProteinID:AEE32552.1 | ArrayExpress:AT1G50450 |
| EnsemblPlantsGene:AT1G50450 | RefSeq:AT1G50450 | TAIR:AT1G50450 | RefSeq:AT1G50450-TAIR-G | EnsemblPlants:AT1G50450.1 | TAIR:AT1G50450.1 |
| EMBL:AY039543 | EMBL:AY097361 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009534 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_564570.1 |
| ProteinID:OAP14160.1 | PFAM:PF03435 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43796 | PANTHER:PTHR43796:SF1 | UniProt:Q94BZ0 | SUPFAM:SSF51735 | InterPro:Sacchrp_dh_NADP |
| UniParc:UPI00000A31B4 | SEG:seg | : | : | : | : |
Description
At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
Coordinates
chr1:-:18687785..18690503
Molecular Weight (calculated)
46562.3 Da
IEP (calculated)
8.271
GRAVY (calculated)
-0.057
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.