CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37136	Canola	mitochondrion	98.11	98.11
AT1G50450.1	Thale cress	mitochondrion	87.26	86.45
VIT_06s0061g00080.t01	Wine grape	plastid	71.7	72.04
KRH24096	Soybean	plastid	70.99	70.16
KRH29070	Soybean	plastid	64.62	68.84
Bra018849.1-P	Field mustard	cytosol, nucleus, peroxisome	95.52	68.64
TraesCS5D01G142600.1	Wheat	plastid	68.16	68.32
Solyc11g065240.1.1	Tomato	plastid	69.1	68.14
TraesCS5A01G136000.1	Wheat	plastid	67.45	67.61
PGSC0003DMT400088617	Potato	mitochondrion	68.4	67.44
TraesCS5B01G135000.2	Wheat	plastid	67.22	67.38
GSMUA_Achr11P...	Banana	plastid	65.8	66.59
EES09230	Sorghum	plastid	65.8	65.65
Os12t0137200-01	Rice	plastid	65.33	64.87
Zm00001d004978_P001	Maize	plastid	53.77	62.64
HORVU5Hr1G043550.6	Barley	mitochondrion	67.22	62.23
Os11t0140700-02	Rice	cytosol, peroxisome	20.52	59.59
TraesCS5A01G135800.1	Wheat	mitochondrion	53.54	57.61
TraesCS5D01G142300.1	Wheat	mitochondrion	53.3	57.07
TraesCS5B01G134600.2	Wheat	mitochondrion	52.12	55.81
KXG28657	Sorghum	plastid	14.39	48.41
OQU79120	Sorghum	extracellular	21.23	28.04

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	GO:A0A078GBN8	UniProt:A0A078GBN8	EnsemblPlants:CDY22796	ProteinID:CDY22796
ProteinID:CDY22796.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00021138001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03435	PANTHER:PTHR43796	PANTHER:PTHR43796:SF1
SUPFAM:SSF51735	InterPro:Sacchrp_dh_NADP	UniParc:UPI0004EE5371	SEG:seg	:	:

Description

BnaA06g02810DBnaA06g02810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBN8]

Coordinates

chrLK032136:-:122393..125315

Molecular Weight (calculated)

46007.8 Da

IEP (calculated)

9.204

GRAVY (calculated)

-0.021

Length

424 amino acids

Sequence
(BLAST)

001: MMARVLPLHH PYRATTVRAS SSNETKYDGV APEVKLADPT RNYRVLVLGG TGRVGGSTAV ALSKLCPKLK IVVAGRNREK GEAMVAKLGE NSEFCKVDIN
101: DANMLQTSLK DVDLVVHAAG PFQQAPKCTV LEAAIKTKTA YIDVCDDTSY AFRAKSLQAE ALAANVPAIT TAGIYPGVSN VMAAEMVAAA RSEDKGKPEK
201: LRFSYYTAGT GGAGPTILAT SFLLLGEEKV KLKPYSGMIN VDFGKGIRKR DVYLLNLPEV RSTHEVLGVP TVSARFGTSP FFWNWGMEIM TKLLPQEVLR
301: DRTKVQQMVD LFDPVVRATD SFSGERVSMR VDLECSDGRV AVGLYSHKKL SVAVGVSTAA FVVAMLEGST QPGVWFPEEP QGIAVEAREA LLRRASQGTF
401: NFILNKPPWM VETVPKEVIL GIYV

Best Arabidopsis Sequence Match ( AT1G50450.1 )
(BLAST)

001: MTRALLLQPY RATVRAASSR ETQYDGVPEV KFSDPSRNYR VLVLGGTGRV GGSTATALSK LCPELKIVVG GRNREKGEAM VAKLGENSEF SQVDINDAKM
101: LETSLRDVDL VVHAAGPFQQ APRCTVLEAA IKTKTAYLDV CDDTSYAFRA KSLEAEAIAA NIPALTTAGI YPGVSNVMAA EMVAAARSED KGKPEKLRFS
201: YYTAGTGGAG PTILATSFLL LGEEVTAYKQ GEKVKLRPYS GMITVDFGKG IRKRDVYLLN LPEVRSTHEV LGVPTVVARF GTAPFFWNWG MEIMTKLLPS
301: EVLRDRTKVQ QMVELFDPVV RAMDGFAGER VSMRVDLECS DGRTTVGLFS HKKLSVSVGV STAAFVAAML EGSTQPGVWF PEEPQGIAVE AREVLLKRAS
401: QGTFNFILNK PPWMVETEPK EVVLGIYV

Arabidopsis Description

At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.