CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17646	Soybean	cytosol, peroxisome, plasma membrane	18.74	19.1
KRH74078	Soybean	cytosol	11.58	10.64
KRH14034	Soybean	plasma membrane	11.58	10.5
HORVU6Hr1G001690.9	Barley	cytosol, nucleus	5.26	5.43
Solyc09g007680.2.1	Tomato	cytosol, nucleus, plasma membrane	5.89	5.41
PGSC0003DMT400004459	Potato	cytosol, nucleus, plasma membrane	5.68	5.23
KRH19853	Soybean	cytosol, peroxisome, plasma membrane	4.21	3.98
TraesCS6A01G001000.1	Wheat	cytosol, nucleus, plasma membrane	3.58	3.86
TraesCS6D01G005100.1	Wheat	plasma membrane	3.79	3.85
KRG95972	Soybean	cytosol, nucleus, plasma membrane	3.37	3.56
KRH32447	Soybean	plasma membrane	3.37	3.29
KRH67679	Soybean	cytosol	2.95	3.2
Bra020758.1-P	Field mustard	cytosol	2.95	3.16
KRH26426	Soybean	plastid	2.95	3.08
AT3G06330.1	Thale cress	cytosol	2.74	3.05
KRH22901	Soybean	cytosol	2.95	2.96
Bra040226.1-P	Field mustard	cytosol	2.53	2.85
CDY24702	Canola	cytosol	2.53	2.71
CDY05254	Canola	cytosol	2.32	2.47
CDY18852	Canola	cytosol	2.11	2.31
Bra001193.1-P	Field mustard	cytosol	2.11	2.29
KRH24873	Soybean	nucleus	2.32	2.14
KRH29926	Soybean	nucleus	2.32	2.1
CDY08057	Canola	cytosol, peroxisome, plasma membrane	1.89	2.06
KRH20994	Soybean	cytosol	1.26	1.95
CDX74109	Canola	cytosol, peroxisome, plasma membrane	1.68	1.83
KRH11284	Soybean	cytosol	1.47	1.66
VIT_12s0034g00630.t01	Wine grape	cytosol, nucleus	0.0	0.0

Protein Annotations

EntrezGene:100779396	MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	UniProt:A0A0R0E898	EMBL:ACUP02012538	EnsemblPlantsGene:GLYMA_20G064600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021
GO:GO:0046872	InterPro:IPR011016	InterPro:IPR013083	EnsemblPlants:KRG90054	ProteinID:KRG90054	ProteinID:KRG90054.1
ProteinID:KRG90055.1	InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF118
SMART:SM00744	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0003DED673	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:22375064..22388660

Molecular Weight (calculated)

51504.7 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.056

Length

475 amino acids

Sequence
(BLAST)

001: MDNAAAELQS VAADPALLLH HQTCAGNGIG DSTSLIPESS RRPSLSSLQI PALSVENALS SFNKTDGPIL ISSPGSSRGL PPRPNSARVI KSTMKTLLSE
101: RSFRAKNSSM DSERTVLIIP DGSPSDGPVD NKPSTSRSLS LNKILFSSST KAAHSLPVTP TANSGPENVH GRHLGCDSDL SKMKVNQHMT RSVSVPVNIK
201: TANLRHTDSR RLVRVISVRS LPGTSGSISA DNASGSEIVN EDASEDIPEE DAVCRICLVE LAEGGNTLRM ECSCKGELAL AHQDCAVKWF SIKGNKTCDV
301: CKQEVQNLPV TLLKITNPQT VTRQPLNAPE PQQREVTSYR IWQDVSVLVL VSMLAYFCFL EELLVSDLGT RALAISLPFS CVLGLLSSMI ASTMVSGSYM
401: WAYACFQFSI VILFAHVFYT ILNVNAILSV LLSSFTGFGI AISLNTLLTE YVRWKTRRQI QSSTARQQRR DHALQ

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.