CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95972	Soybean	cytosol, nucleus, plasma membrane	74.66	72.67
VIT_08s0040g01950.t01	Wine grape	cytosol, nucleus, plasma membrane	25.57	21.71
CDY41589	Canola	nucleus	19.86	19.12
KRH19853	Soybean	cytosol, peroxisome, plasma membrane	21.92	19.09
CDY07939	Canola	cytosol, nucleus, plasma membrane	19.18	18.67
CDY44728	Canola	cytosol, nucleus, plasma membrane	19.41	18.12
Bra029786.1-P	Field mustard	nucleus	18.72	18.02
Bra029787.1-P	Field mustard	nucleus	18.72	17.94
CDY41588	Canola	nucleus	17.81	16.15
CDX73994	Canola	cytosol	16.67	15.3
EES10335	Sorghum	nucleus	10.96	9.27
Zm00001d024927_P002	Maize	cytosol	10.5	8.9
KRH22901	Soybean	cytosol	9.59	8.88
Os04t0105100-01	Rice	plasma membrane	9.13	8.71
KRH26426	Soybean	plastid	8.9	8.57
Os06t0340200-02	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	9.36	8.25
KRH32447	Soybean	plasma membrane	8.9	8.02
TraesCS2D01G037600.3	Wheat	plasma membrane	9.59	7.97
Zm00001d016874_P001	Maize	cytosol, endoplasmic reticulum, nucleus	9.13	7.87
TraesCS6B01G005200.1	Wheat	cytosol, nucleus, plasma membrane	7.76	7.46
EES04310	Sorghum	plasma membrane	8.9	6.96
KRH17646	Soybean	cytosol, peroxisome, plasma membrane	6.85	6.44
KRH14034	Soybean	plasma membrane	7.08	5.92
KRH74078	Soybean	cytosol	6.39	5.42
KRH24873	Soybean	nucleus	5.48	4.67
KRH29926	Soybean	nucleus	5.02	4.21
KRH11284	Soybean	cytosol	3.88	4.03
KRG90054	Soybean	cytosol, peroxisome, vacuole	3.2	2.95
KRH20994	Soybean	cytosol	2.05	2.93

Protein Annotations

EntrezGene:100783117	MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	EMBL:ACUP02002069	EnsemblPlantsGene:GLYMA_03G180200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872
UniProt:I1JPL6	InterPro:IPR011016	InterPro:IPR013083	EnsemblPlants:KRH67679	ProteinID:KRH67679	ProteinID:KRH67679.1
InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF92	SMART:SM00744
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000233931A	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:39223917..39229263

Molecular Weight (calculated)

48737.0 Da

IEP (calculated)

6.578

GRAVY (calculated)

-0.111

Length

438 amino acids

Sequence
(BLAST)

001: MATEAHRFPK INNDQGSSSI PHNPIQKDVE SSEITEELPS RHAHGRRKNL ILEIPTRTLD ETREEFFRTN QPPTPSPRSQ INEFQGPLST KNIKFHKISS
101: DVEEASIPAL DGSPPEPLQE PMISRTLSPN EMKISSLPVT PIAQSNLESG HGGNIAYPAT HVKKGLQLPM HRSRSVPVLT EDDSTYVGAM FRIVPTTPRL
201: TKSIATTSMK SPPDDTVENE DGEDIPEEEA VCRICLIELG EGSDTLKMEC SCKGELALAH QECAVKWFSI KGNRTCDVCK QEVQNLPVTL LRVLNGQTLY
301: LTRSRSQQYR VWQNIPILVI INMLAYFCFL EQLLVSSMGS GAVAISLPFS CILGLLASMT STIMVTCEHV WVYAIAQFVM VVLAGRLFYS LLNKQAVLSI
401: LLATFTGFGA VMCGAYILIE FLKWRRRWLG SQEVVLPH

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.