CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26426	Soybean	plastid	56.45	58.68
CDY09194	Canola	cytosol, peroxisome, plasma membrane	21.78	21.5
Bra020240.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.2	21.34
Bra002470.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.35	21.04
CDY31533	Canola	cytosol, nucleus, plasma membrane	21.99	20.88
VIT_06s0004g02930.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.35	20.36
CDY67417	Canola	endoplasmic reticulum, plasma membrane	21.56	19.96
AT5G60580.4	Thale cress	cytosol, nucleus, peroxisome	19.66	18.83
KRH67679	Soybean	cytosol	8.88	9.59
KRH29926	Soybean	nucleus	10.36	9.37
KRG95972	Soybean	cytosol, nucleus, plasma membrane	8.25	8.67
KRH24873	Soybean	nucleus	9.3	8.56
TraesCS2A01G039300.2	Wheat	cytosol, peroxisome, plasma membrane	8.46	7.91
TraesCS2B01G051700.1	Wheat	cytosol, peroxisome, plasma membrane	8.25	7.89
HORVU2Hr1G005630.19	Barley	mitochondrion	8.46	7.08
KRH20994	Soybean	cytosol	2.96	4.56
KRH19853	Soybean	cytosol, peroxisome, plasma membrane	4.65	4.37
KRH17646	Soybean	cytosol, peroxisome, plasma membrane	4.23	4.29
KRH74078	Soybean	cytosol	4.23	3.87
KRH11284	Soybean	cytosol	2.96	3.32
KRH14034	Soybean	plasma membrane	3.59	3.24
KRH32447	Soybean	plasma membrane	3.17	3.09
KRG90054	Soybean	cytosol, peroxisome, vacuole	2.96	2.95

Protein Annotations

EntrezGene:100815599	MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	EMBL:ACUP02008440	EnsemblPlantsGene:GLYMA_13G326500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872
UniProt:I1M4L2	InterPro:IPR011016	InterPro:IPR013083	EnsemblPlants:KRH22901	ProteinID:KRH22901	ProteinID:KRH22901.1
InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF25	SMART:SM00744
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0002964A3D	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:42146835..42151452

Molecular Weight (calculated)

52440.4 Da

IEP (calculated)

9.695

GRAVY (calculated)

-0.219

Length

473 amino acids

Sequence
(BLAST)

001: MSAHQKEKHN APSSKPTVSH PLHKVDDPMG VTDENETLRV SNQWKRQNLL QLEIPARTSE ESSSQDFVGI RMPLTPSPTP SQKRVNFLVT SRSVDAPKPP
101: SSSSRAKPSM RNILPKFGFR NRAPSISLDV EKGVTTAAQE GSFSGHQEKS SIPRSVSLTK MFTPKIKRTS SLPVEELGRA NVESVLCGTL GASPCGRETQ
201: GMIARSRSVP VNTKEKGIRR LDSVFRIIPS TPRVIEVNET RKDTENGDDG EDIAEEEAVC RICLVDLCEG GETLKMECSC KGELALAHQE CAIKWFSIKG
301: NKTCDVCKEE VRNLPVTLLR IRSVRAQNTR ARSEQGDDFR AWQELPVLVI VSMLAYFCFL EQLLVGRMRT KAIFISLPFA CVLGLLSSVT SSTMVKSRFI
401: WIYASVQFVL VVIFAHIFYP LVGKHAVLAI LLATFAGFGV VMSGSSILLE SSRWRRRWQA QQRGSSAMTQ EGL

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.