Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24873 | Soybean | nucleus | 73.81 | 75.1 |
| PGSC0003DMT400020932 | Potato | cytosol, peroxisome, plasma membrane | 42.06 | 42.8 |
| Solyc11g069350.1.1 | Tomato | cytosol, nucleus, plasma membrane | 42.26 | 42.26 |
| KRH26426 | Soybean | plastid | 20.46 | 23.52 |
| KRH22901 | Soybean | cytosol | 9.37 | 10.36 |
| KRH19853 | Soybean | cytosol, peroxisome, plasma membrane | 8.22 | 8.55 |
| KRH32447 | Soybean | plasma membrane | 6.12 | 6.58 |
| TraesCS6A01G001000.1 | Wheat | cytosol, nucleus, plasma membrane | 4.78 | 5.68 |
| TraesCS6D01G005100.1 | Wheat | plasma membrane | 4.59 | 5.14 |
| KRH67679 | Soybean | cytosol | 4.21 | 5.02 |
| KRG95972 | Soybean | cytosol, nucleus, plasma membrane | 4.21 | 4.89 |
| KRH74078 | Soybean | cytosol | 4.78 | 4.84 |
| KRH20994 | Soybean | cytosol | 2.68 | 4.56 |
| KRH14034 | Soybean | plasma membrane | 4.4 | 4.39 |
| KRH11284 | Soybean | cytosol | 3.44 | 4.27 |
| KRH17646 | Soybean | cytosol, peroxisome, plasma membrane | 3.06 | 3.43 |
| HORVU6Hr1G001690.9 | Barley | cytosol, nucleus | 2.87 | 3.26 |
| KRG90054 | Soybean | cytosol, peroxisome, vacuole | 2.1 | 2.32 |
Protein Annotations
| EntrezGene:100815566 | MapMan:19.2.2.1.5.3.4 | Gene3D:3.30.40.10 | EMBL:ACUP02006836 | EnsemblPlantsGene:GLYMA_11G147100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| UniProt:I1LL61 | InterPro:IPR011016 | InterPro:IPR013083 | EnsemblPlants:KRH29926 | ProteinID:KRH29926 | ProteinID:KRH29926.1 |
| InterPro:MARCH-like | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR23012 | PANTHER:PTHR23012:SF25 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI00023CBC3B | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:-:11339517..11345436
Molecular Weight (calculated)
57552.7 Da
IEP (calculated)
8.870
GRAVY (calculated)
-0.360
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSTEEKPVT VSEEHDASSC RRTVSLPVQK VDDPMAITEE TTHVPPRKRQ NLLLEIPSRT EESSQEFVAI KMPPTPSSNP TPTPKRVNFL VSSRSVDPPT
101: YHSPGPSTSR GKSSIRNLLP KLSFRYRTPA DIEKPNTAAP EVSSTGTGEK PSISRSLSLT KIFTPRIKRA SSLPLDEIRQ SNNESSQGGS VGGPLNKREA
201: QRKIARSLSV PANDKDKSLR RMDSFFRVVP STPQVKEGNE LLATHTTNDT ENEDANGEDI AEEEAVCRIC LVDLCEGGET FKLECSCKGE LALAHQECAI
301: KWFSIKGNKT CDVCKEEVRN LPVTLLRIQS IRNRNNGGNR TQLEDVNGYR VWQEVPVLVI VSMLAYFCFL EQLLVGKMGT GAIAISLPFS CVLGLLSSMT
401: SSTMVKSRFI WIYASVQFAL VVLFAHIFYS VVHVQAVLSI LLATFAGFGV VMSGSSILVE YFRWRRRVQA LSEQRHGPQL MPQAGQNPRT SNVQRPGPGS
501: GSGLAPSNHS QPVVQNQQNS NQS
101: YHSPGPSTSR GKSSIRNLLP KLSFRYRTPA DIEKPNTAAP EVSSTGTGEK PSISRSLSLT KIFTPRIKRA SSLPLDEIRQ SNNESSQGGS VGGPLNKREA
201: QRKIARSLSV PANDKDKSLR RMDSFFRVVP STPQVKEGNE LLATHTTNDT ENEDANGEDI AEEEAVCRIC LVDLCEGGET FKLECSCKGE LALAHQECAI
301: KWFSIKGNKT CDVCKEEVRN LPVTLLRIQS IRNRNNGGNR TQLEDVNGYR VWQEVPVLVI VSMLAYFCFL EQLLVGKMGT GAIAISLPFS CVLGLLSSMT
401: SSTMVKSRFI WIYASVQFAL VVLFAHIFYS VVHVQAVLSI LLATFAGFGV VMSGSSILVE YFRWRRRVQA LSEQRHGPQL MPQAGQNPRT SNVQRPGPGS
501: GSGLAPSNHS QPVVQNQQNS NQS
001: MATEEKPLNS LDLSHDDSSP ASNQAEGSSA ITEDTSANVQ QWRRKNLSLQ IPSRAAGLSP EDSVVIKMPP TPSPTPRRVN FALTSSSPGP TPTSSSVLPR
101: GKSSLKNLLP KAGCKPKTSN TDIEKGQGNA CSPPASQEKA SISRSLSLSK LFTPRIKRTS SLPVTPVILS NSESAHGGTS VAPQTPNRKG SVHIARSRSV
201: PLNDKELSLK GMDSFFRVIP STPRVKEGDV FSNASEAGNT ETGDADGEDI PEDEAVCRIC LVELCEGGET LKMECSCKGE LALAHKDCAL KWFTIKGNKT
301: CEVCKQEVKN LPVTLLRIQS LRNSGVPQLD VSGYRVWQEV PVLVIISMLA YFCFLEQLLV ENMGTGAIAI SLPFSCILGL LASMTASTMV MRRFVWIYAS
401: VQFALVVLFA HIFYSVVKLQ PVLSVLLSTF AGFGVCICGS SVMVEFVRWR RRWRARRLEQ QLNHALTLSQ PPQPLDPTTS LHHSNTS
101: GKSSLKNLLP KAGCKPKTSN TDIEKGQGNA CSPPASQEKA SISRSLSLSK LFTPRIKRTS SLPVTPVILS NSESAHGGTS VAPQTPNRKG SVHIARSRSV
201: PLNDKELSLK GMDSFFRVIP STPRVKEGDV FSNASEAGNT ETGDADGEDI PEDEAVCRIC LVELCEGGET LKMECSCKGE LALAHKDCAL KWFTIKGNKT
301: CEVCKQEVKN LPVTLLRIQS LRNSGVPQLD VSGYRVWQEV PVLVIISMLA YFCFLEQLLV ENMGTGAIAI SLPFSCILGL LASMTASTMV MRRFVWIYAS
401: VQFALVVLFA HIFYSVVKLQ PVLSVLLSTF AGFGVCICGS SVMVEFVRWR RRWRARRLEQ QLNHALTLSQ PPQPLDPTTS LHHSNTS
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K0E2]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.