Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67679 | Soybean | cytosol | 72.67 | 74.66 |
| VIT_08s0040g01950.t01 | Wine grape | cytosol, nucleus, plasma membrane | 26.22 | 22.87 |
| KRH19853 | Soybean | cytosol, peroxisome, plasma membrane | 22.22 | 19.88 |
| Bra029786.1-P | Field mustard | nucleus | 19.11 | 18.9 |
| Bra029787.1-P | Field mustard | nucleus | 18.89 | 18.6 |
| CDY41589 | Canola | nucleus | 18.44 | 18.24 |
| CDY07939 | Canola | cytosol, nucleus, plasma membrane | 18.0 | 18.0 |
| CDY44728 | Canola | cytosol, nucleus, plasma membrane | 18.67 | 17.91 |
| CDY41588 | Canola | nucleus | 18.0 | 16.77 |
| CDX73994 | Canola | cytosol | 15.56 | 14.68 |
| KRH32447 | Soybean | plasma membrane | 10.22 | 9.47 |
| Os04t0105100-01 | Rice | plasma membrane | 9.11 | 8.93 |
| Zm00001d024927_P002 | Maize | cytosol | 10.22 | 8.9 |
| EES10335 | Sorghum | nucleus | 10.22 | 8.88 |
| TraesCS2D01G037600.3 | Wheat | plasma membrane | 10.0 | 8.54 |
| KRH26426 | Soybean | plastid | 8.44 | 8.35 |
| KRH22901 | Soybean | cytosol | 8.67 | 8.25 |
| Zm00001d016874_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 9.11 | 8.07 |
| Os06t0340200-02 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 8.89 | 8.05 |
| TraesCS6B01G005200.1 | Wheat | cytosol, nucleus, plasma membrane | 7.33 | 7.24 |
| EES04310 | Sorghum | plasma membrane | 8.44 | 6.79 |
| KRH74078 | Soybean | cytosol | 7.33 | 6.38 |
| KRH17646 | Soybean | cytosol, peroxisome, plasma membrane | 6.22 | 6.01 |
| KRH14034 | Soybean | plasma membrane | 6.89 | 5.92 |
| KRH20994 | Soybean | cytosol | 3.33 | 4.89 |
| KRH11284 | Soybean | cytosol | 4.0 | 4.27 |
| KRH29926 | Soybean | nucleus | 4.89 | 4.21 |
| KRH24873 | Soybean | nucleus | 4.44 | 3.89 |
| KRG90054 | Soybean | cytosol, peroxisome, vacuole | 3.56 | 3.37 |
Protein Annotations
| EntrezGene:100789854 | MapMan:19.2.2.1.5.3.4 | Gene3D:3.30.40.10 | EMBL:ACUP02012141 | EnsemblPlantsGene:GLYMA_19G180900 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| InterPro:IPR011016 | InterPro:IPR013083 | UniProt:K7MZ08 | EnsemblPlants:KRG95972 | ProteinID:KRG95972 | ProteinID:KRG95972.1 |
| InterPro:MARCH-like | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR23012 | PANTHER:PTHR23012:SF92 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000233F5BD | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:43965425..43970243
Molecular Weight (calculated)
49978.0 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.185
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEAHHFPK INDQGTSSSS RAYNPIQKDV EPSEITEELP SRHTHGRSKS LTEIPTRTLD ETREEFFRTS KPPTPSLRSQ INEFQVPSST KNESTTKTLI
101: PKLSFKFHNT CSDVEEASIP ALEGSPPERL QDPIISRTSS PNGKKISSLP VTPIAQSNQE SEHGGNISYP ATHVKKGQQL PMHRSRSVPV LTEDGNTYVG
201: AMFRIVPTTP RLARSIATTS TKSPPDDTIE NEDGEDIPEE EAVCRICLIE LGEGSDTLKM ECSCKGELAL AHQECAVKWF SIKGNRTCDV CKQEVQNLPV
301: TLLRVLNGQT LYLTRSRSQQ YRVWQNVPIL VIINMLAYFC FLEQLLVSSM GSGAVAISLP FSCILGLLAS MTSTIMVTCE HVWVYAIAQF VMVVLAGRLF
401: YSLLNKEAVL SILLATFTGF GAVMCGAYIL IEFLKWRRRW LGSQEVVLPH
101: PKLSFKFHNT CSDVEEASIP ALEGSPPERL QDPIISRTSS PNGKKISSLP VTPIAQSNQE SEHGGNISYP ATHVKKGQQL PMHRSRSVPV LTEDGNTYVG
201: AMFRIVPTTP RLARSIATTS TKSPPDDTIE NEDGEDIPEE EAVCRICLIE LGEGSDTLKM ECSCKGELAL AHQECAVKWF SIKGNRTCDV CKQEVQNLPV
301: TLLRVLNGQT LYLTRSRSQQ YRVWQNVPIL VIINMLAYFC FLEQLLVSSM GSGAVAISLP FSCILGLLAS MTSTIMVTCE HVWVYAIAQF VMVVLAGRLF
401: YSLLNKEAVL SILLATFTGF GAVMCGAYIL IEFLKWRRRW LGSQEVVLPH
001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
Arabidopsis Description
At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.