CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74078	Soybean	cytosol	47.52	48.16
VIT_12s0028g01200.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	24.05	24.14
KRH17646	Soybean	cytosol, peroxisome, plasma membrane	20.99	23.61
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	4.77	16.67
Os06t0677300-01	Rice	plasma membrane	11.45	12.42
EER88810	Sorghum	cytosol, nucleus, plasma membrane, plastid	11.26	12.22
Zm00001d014385_P001	Maize	cytosol, nucleus, plasma membrane, plastid	10.69	11.62
KRG90054	Soybean	cytosol, peroxisome, vacuole	10.5	11.58
Os02t0165000-01	Rice	plasma membrane	10.69	11.5
Solyc07g044780.2.1	Tomato	cytosol	11.26	11.41
GSMUA_Achr5P00540_001	Banana	cytosol, nucleus, plasma membrane	10.11	10.49
TraesCS7A01G463200.1	Wheat	cytosol, nucleus, plasma membrane	9.16	9.9
TraesCS7D01G451000.1	Wheat	cytosol, nucleus, plasma membrane	8.97	9.69
TraesCS7B01G363900.1	Wheat	cytosol, nucleus, plasma membrane	8.59	9.32
HORVU0Hr1G022270.4	Barley	plastid	9.54	9.14
KRH67679	Soybean	cytosol	5.92	7.08
KRG95972	Soybean	cytosol, nucleus, plasma membrane	5.92	6.89
KRH19853	Soybean	cytosol, peroxisome, plasma membrane	6.3	6.56
CDY69891	Canola	plasma membrane	2.1	5.91
KRH32447	Soybean	plasma membrane	4.96	5.35
KRH29926	Soybean	nucleus	4.39	4.4
KRH22901	Soybean	cytosol	3.24	3.59
KRH24873	Soybean	nucleus	3.24	3.31
KRH26426	Soybean	plastid	2.67	3.08
KRH20994	Soybean	cytosol	1.53	2.61
KRH11284	Soybean	cytosol	1.53	1.9

Protein Annotations

EntrezGene:100798208	MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	UniProt:A0A0R0GDU5	EMBL:ACUP02008491	EnsemblPlantsGene:GLYMA_14G002700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021
GO:GO:0046872	InterPro:IPR011016	InterPro:IPR013083	EnsemblPlants:KRH14034	ProteinID:KRH14034	ProteinID:KRH14034.1
InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF118	SMART:SM00744
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0006ED779B	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:284508..291513

Molecular Weight (calculated)

58068.8 Da

IEP (calculated)

8.662

GRAVY (calculated)

-0.135

Length

524 amino acids

Sequence
(BLAST)

001: MLIIIKSKSK YNIIHYGVWA FDAVSVTVLP KRFLGWKIET CTGNEKSNKA SRIPQSRRPN LSSLQIPAWS LDIALSTFAK TDGPSVSRSS PGSTRGLPPR
101: PNSAKVRSSM RGLLPQRSFK INACSQDIER TGLIVPNTPP SDAPLDKPST STSLSLNNRV ISPSTKVSHS LPVTPFATSS AENEHGRHLG RDSDLSTMEV
201: HQHMTRSFSV PVDGKATNLR VTDSRGLIRV ISAKRHLETV GGKSTDGAFV PEIAIEDATE DIPEEQAVCR ICLVELGEGG NTLKMECSCK GDLALAHQEC
301: AVKWFSIKGN RTCDVCKLDV QNLPVTLLKI YNPLTPARQA SNVPQQSEIV YYSYFMHNRI WQDVPVLILV SMLAYFCFLE QLLVSDLGPR ALAISLPFSC
401: VLGLLSSMIA STMVSRSFVW AYACFQFATL ILLAHVFYTI LNFNAILSIL LSTFTGFGIA ISMNSLVMEF IGWRTSRQVQ SSFVNVNWTE QQHREHVQEQ
501: GQEDGGQHQR QRQQEHHLPQ HGNS

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.