Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029787.1-P | Field mustard | nucleus | 28.43 | 31.29 |
| KRH32447 | Soybean | plasma membrane | 29.22 | 30.25 |
| VIT_08s0040g01950.t01 | Wine grape | cytosol, nucleus, plasma membrane | 22.86 | 22.29 |
| KRG95972 | Soybean | cytosol, nucleus, plasma membrane | 19.88 | 22.22 |
| KRH67679 | Soybean | cytosol | 19.09 | 21.92 |
| CDY41589 | Canola | nucleus | 17.69 | 19.56 |
| CDX73994 | Canola | cytosol | 17.89 | 18.87 |
| CDY44728 | Canola | cytosol, nucleus, plasma membrane | 16.9 | 18.12 |
| CDY41588 | Canola | nucleus | 16.9 | 17.6 |
| Bra029786.1-P | Field mustard | nucleus | 15.71 | 17.36 |
| CDY07939 | Canola | cytosol, nucleus, plasma membrane | 15.51 | 17.33 |
| EES10335 | Sorghum | nucleus | 11.93 | 11.58 |
| Zm00001d024927_P002 | Maize | cytosol | 11.73 | 11.41 |
| Os04t0105100-01 | Rice | plasma membrane | 10.34 | 11.33 |
| TraesCS2D01G037600.3 | Wheat | plasma membrane | 11.13 | 10.63 |
| Os06t0340200-02 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 10.34 | 10.46 |
| TraesCS6B01G005200.1 | Wheat | cytosol, nucleus, plasma membrane | 8.35 | 9.21 |
| EES04310 | Sorghum | plasma membrane | 9.94 | 8.93 |
| Zm00001d016874_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 8.55 | 8.46 |
| KRH29926 | Soybean | nucleus | 8.55 | 8.22 |
| KRH17646 | Soybean | cytosol, peroxisome, plasma membrane | 6.56 | 7.08 |
| KRH24873 | Soybean | nucleus | 7.16 | 7.0 |
| KRH74078 | Soybean | cytosol | 7.16 | 6.96 |
| KRH14034 | Soybean | plasma membrane | 6.56 | 6.3 |
| KRH26426 | Soybean | plastid | 4.97 | 5.49 |
| KRH22901 | Soybean | cytosol | 4.37 | 4.65 |
| KRG90054 | Soybean | cytosol, peroxisome, vacuole | 3.98 | 4.21 |
| KRH11284 | Soybean | cytosol | 1.79 | 2.13 |
| KRH20994 | Soybean | cytosol | 1.19 | 1.95 |
Protein Annotations
| EntrezGene:100787963 | MapMan:19.2.2.1.5.3.4 | Gene3D:3.30.40.10 | EMBL:ACUP02008210 | EnsemblPlantsGene:GLYMA_13G139200 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| UniProt:I1LZ38 | InterPro:IPR011016 | InterPro:IPR013083 | EnsemblPlants:KRH19853 | ProteinID:KRH19853 | ProteinID:KRH19853.1 |
| InterPro:MARCH-like | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR23012 | PANTHER:PTHR23012:SF92 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI00023CF533 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:25182149..25187281
Molecular Weight (calculated)
54902.1 Da
IEP (calculated)
7.871
GRAVY (calculated)
-0.184
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEAAGSSK DNNNQGHVTT ENRADIPKQK GPAPSEITEE LPREQHGARQ NLILDIPAIS QEEAREDYVR INMPLTPPPR RVIFSPCPSP VFPRSKESPG
101: PSSSKSKSNI KTFLPKLSLK FRNTSSEIEK AAFLALEGST VAPKKPFLSR TLSLVTPRGK KTSSLPVTPI AHSNPGSVHG GNLVYAETVE KELNLPIHRS
201: RSVPVLNKEG NSPVRGMFRI VPTTLRLDEK IASATPMTSP IHDTVKNEDG GEDIPEEEAV CRICFVELGE GADTFKLECS CKGELSLAHR ECVVKWFTIK
301: GNRTCDVCKQ EVQNLPVTLL RVQNGQAHNM LGADASQYRV WQDAPILVVI NMLAYFCFLE QLLVSNMGSG AIAMSLPFSC ILGLLASMTA TTMVRRNHVW
401: IYATVQFCLV VLAGHLFFSL VHMQAVLAIL LATFTGFGVV MCGASILMEI LKWRGRSLAQ SNQQQGSQEA IPPPDQSSTV AHQPQIGSEQ TESNLGESPA
501: QRS
101: PSSSKSKSNI KTFLPKLSLK FRNTSSEIEK AAFLALEGST VAPKKPFLSR TLSLVTPRGK KTSSLPVTPI AHSNPGSVHG GNLVYAETVE KELNLPIHRS
201: RSVPVLNKEG NSPVRGMFRI VPTTLRLDEK IASATPMTSP IHDTVKNEDG GEDIPEEEAV CRICFVELGE GADTFKLECS CKGELSLAHR ECVVKWFTIK
301: GNRTCDVCKQ EVQNLPVTLL RVQNGQAHNM LGADASQYRV WQDAPILVVI NMLAYFCFLE QLLVSNMGSG AIAMSLPFSC ILGLLASMTA TTMVRRNHVW
401: IYATVQFCLV VLAGHLFFSL VHMQAVLAIL LATFTGFGVV MCGASILMEI LKWRGRSLAQ SNQQQGSQEA IPPPDQSSTV AHQPQIGSEQ TESNLGESPA
501: QRS
001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
Arabidopsis Description
At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.