Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0028g01200.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 33.05 | 29.5 |
| KRH14034 | Soybean | plasma membrane | 23.61 | 20.99 |
| KRH74078 | Soybean | cytosol | 21.46 | 19.34 |
| KRG90054 | Soybean | cytosol, peroxisome, vacuole | 19.1 | 18.74 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 5.79 | 18.0 |
| Os02t0165000-01 | Rice | plasma membrane | 17.38 | 16.63 |
| Zm00001d014385_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 14.16 | 13.69 |
| Os06t0677300-01 | Rice | plasma membrane | 13.95 | 13.46 |
| EER88810 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 13.3 | 12.84 |
| TraesCS7D01G451000.1 | Wheat | cytosol, nucleus, plasma membrane | 12.88 | 12.37 |
| TraesCS7A01G463200.1 | Wheat | cytosol, nucleus, plasma membrane | 12.66 | 12.16 |
| TraesCS7B01G363900.1 | Wheat | cytosol, nucleus, plasma membrane | 12.45 | 12.01 |
| HORVU0Hr1G022270.4 | Barley | plastid | 13.52 | 11.52 |
| GSMUA_Achr5P00540_001 | Banana | cytosol, nucleus, plasma membrane | 11.8 | 10.89 |
| Solyc07g044780.2.1 | Tomato | cytosol | 11.16 | 10.06 |
| KRH67679 | Soybean | cytosol | 6.44 | 6.85 |
| KRH19853 | Soybean | cytosol, peroxisome, plasma membrane | 7.08 | 6.56 |
| KRG95972 | Soybean | cytosol, nucleus, plasma membrane | 6.01 | 6.22 |
| KRH32447 | Soybean | plasma membrane | 5.36 | 5.14 |
| CDY69891 | Canola | plasma membrane | 1.72 | 4.3 |
| KRH22901 | Soybean | cytosol | 4.29 | 4.23 |
| KRH11284 | Soybean | cytosol | 3.0 | 3.32 |
| KRH26426 | Soybean | plastid | 3.22 | 3.3 |
| KRH24873 | Soybean | nucleus | 3.43 | 3.11 |
| KRH29926 | Soybean | nucleus | 3.43 | 3.06 |
| KRH20994 | Soybean | cytosol | 1.93 | 2.93 |
Protein Annotations
| EntrezGene:100791140 | MapMan:19.2.2.1.5.3.4 | Gene3D:3.30.40.10 | EMBL:ACUP02007825 | EnsemblPlantsGene:GLYMA_13G005300 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| InterPro:IPR011016 | InterPro:IPR013083 | UniProt:K7LYB3 | EnsemblPlants:KRH17646 | ProteinID:KRH17646 | ProteinID:KRH17646.1 |
| InterPro:MARCH-like | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR23012 | PANTHER:PTHR23012:SF118 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000294CC01 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:1456824..1467203
Molecular Weight (calculated)
50364.5 Da
IEP (calculated)
8.015
GRAVY (calculated)
0.020
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNAAAELQS EAADPALLLR HQTCAGNGIG DSTSLIPESS RRPSLSSLQI PARSVENALS SFNKTDGPTL ISSAGSSRGL PPRPNSASAI KSTMRTLLSE
101: RSFRAKNSSQ DSERTVLIVP DASPSDGPVD NKPSTSRSLS LNKFLFASST KAGHSLPVTP TANSGVENVH GRHLGCDSDL SKVKVNQHMT RSVSVPVNIK
201: TANLRHTDSR RLVRVISVRS LPGTSGGISA DNALGSEIVN EDASEDIPEE DAVCRICLVE LVEGGNTLRM ECSCKGELAL AHQDCAVKWF SIKGNKTCDV
301: CKQEVQNLPV TLLKISNPQT VTRQPLNAPE PQQREVTSYR IWQDVSVLVL VSMLAYFCFL EELLVSVLGT RALAISLPFS CVLGLLSSMI ASTMVSGSYM
401: WAYACFQFAI VILFAHVFYT ILNVNAILSV LLSSFTGFGI AISLNTLLME YVRWRTRRLI QASMTQ
101: RSFRAKNSSQ DSERTVLIVP DASPSDGPVD NKPSTSRSLS LNKFLFASST KAGHSLPVTP TANSGVENVH GRHLGCDSDL SKVKVNQHMT RSVSVPVNIK
201: TANLRHTDSR RLVRVISVRS LPGTSGGISA DNALGSEIVN EDASEDIPEE DAVCRICLVE LVEGGNTLRM ECSCKGELAL AHQDCAVKWF SIKGNKTCDV
301: CKQEVQNLPV TLLKISNPQT VTRQPLNAPE PQQREVTSYR IWQDVSVLVL VSMLAYFCFL EELLVSVLGT RALAISLPFS CVLGLLSSMI ASTMVSGSYM
401: WAYACFQFAI VILFAHVFYT ILNVNAILSV LLSSFTGFGI AISLNTLLME YVRWRTRRLI QASMTQ
001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N
Arabidopsis Description
At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.