CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19853	Soybean	cytosol, peroxisome, plasma membrane	30.25	29.22
Bra009532.1-P	Field mustard	endoplasmic reticulum, extracellular	2.88	11.38
KRG95972	Soybean	cytosol, nucleus, plasma membrane	9.47	10.22
KRH67679	Soybean	cytosol	8.02	8.9
CDX70311	Canola	cytosol	5.35	8.47
CDY44346	Canola	cytosol	7.2	8.39
CDY62901	Canola	cytosol	7.2	8.35
CDY10383	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	4.73	7.93
CDY10402	Canola	mitochondrion	4.94	6.49
Bra028847.1-P	Field mustard	cytosol	4.53	6.34
AT5G03180.2	Thale cress	nucleus	5.97	6.22
KRH29926	Soybean	nucleus	6.58	6.12
KRH26426	Soybean	plastid	5.35	5.71
KRH17646	Soybean	cytosol, peroxisome, plasma membrane	5.14	5.36
KRH74078	Soybean	cytosol	5.35	5.03
KRH14034	Soybean	plasma membrane	5.35	4.96
KRH24873	Soybean	nucleus	5.14	4.86
KRG90054	Soybean	cytosol, peroxisome, vacuole	3.29	3.37
KRH22901	Soybean	cytosol	3.09	3.17
KRH11284	Soybean	cytosol	2.67	3.08
KRH20994	Soybean	cytosol	1.85	2.93

Protein Annotations

EntrezGene:100811800	MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	UniProt:A0A0R0I151	EMBL:ACUP02006117	EnsemblPlantsGene:GLYMA_10G051800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021
GO:GO:0046872	InterPro:IPR011016	InterPro:IPR013083	EnsemblPlants:KRH32447	ProteinID:KRH32447	ProteinID:KRH32447.1
InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF92	SMART:SM00744
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0006EDF54B	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:4647260..4654544

Molecular Weight (calculated)

53565.7 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.178

Length

486 amino acids

Sequence
(BLAST)

001: MKHVCFKLTP QLVSMLKRQL FFLFGLVGPP LNMATEAAGS SKDNINQGHG TTENRADTPI QKGPASSEIT EEFPREQHGT RQNLILDIPA ISQEEARKDY
101: ARINMPLTSP PRRLIFPPGL SPVFPRSKKY PVLLVTPRGK KTSSLPVTAI AYSNPGSVHG GNLAFAETAK KELNFPIRRS RSAPMLNKEG NSPVRGMFRI
201: VPTTLRLDEK IATTPPMTSP IHDTVKNEDG GEDIPEEEAV CRICMVELGE GGNTFKLECG CKGDLSLAHR GCAVKWFTIK GNRTCDVCKQ EVQNLTVTLL
301: RVQNGLAQNG LAQNGLAHNM LGADASRYRF WPDFAILVVI NMLAYFWFHV SNMGSGTIVH CLAFSCVLGS LASFTATVMV RRNHVWIYAT VQFCLVFLIE
401: HLFFSLFHRS NIDAVTCTGM AVVMCGNFIL TEILKWRGRS LAQSNQQQGS QEAVPPPDQS STIPHQAQIG SEQTESNLGE SHAQRS

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.